Hb_005054_330

Information

Type -
Description -
Location Contig5054: 246906-248351
Sequence    

Annotation

kegg
ID rcu:RCOM_0592300
description hypothetical protein
nr
ID XP_012087761.1
description PREDICTED: nematode resistance protein-like HSPRO2 [Jatropha curcas]
swissprot
ID O04203
description Nematode resistance protein-like HSPRO2 OS=Arabidopsis thaliana GN=HSPRO2 PE=1 SV=1
trembl
ID A0A067LC73
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01313 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005054_330 0.0 - - PREDICTED: nematode resistance protein-like HSPRO2 [Jatropha curcas]
2 Hb_007858_020 0.0476012918 - - PREDICTED: probable protein phosphatase 2C 25 [Jatropha curcas]
3 Hb_167186_010 0.0612137703 - - cation-transporting atpase plant, putative [Ricinus communis]
4 Hb_000959_240 0.0757189198 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
5 Hb_008725_220 0.0761044004 - - PREDICTED: uncharacterized protein LOC105642593 [Jatropha curcas]
6 Hb_000164_160 0.0768685791 transcription factor TF Family: GRAS PREDICTED: chitin-inducible gibberellin-responsive protein 1-like isoform X1 [Jatropha curcas]
7 Hb_003207_230 0.0807465489 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 1B-like [Jatropha curcas]
8 Hb_124953_010 0.0835526097 - - hypothetical protein RCOM_1314600 [Ricinus communis]
9 Hb_004032_220 0.0899975567 - - Calmodulin, putative [Ricinus communis]
10 Hb_000627_130 0.0913972664 - - Polcalcin Jun o, putative [Ricinus communis]
11 Hb_002542_030 0.0926640673 transcription factor TF Family: Tify JAZ7 [Hevea brasiliensis]
12 Hb_000032_150 0.094030454 transcription factor TF Family: WRKY hypothetical protein RCOM_1691430 [Ricinus communis]
13 Hb_004899_010 0.106786746 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
14 Hb_001999_170 0.1082356122 - - PREDICTED: uncharacterized protein LOC105630609 [Jatropha curcas]
15 Hb_047955_010 0.1130190496 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
16 Hb_000808_090 0.1153351201 - - PREDICTED: uncharacterized protein LOC105647449 [Jatropha curcas]
17 Hb_001153_250 0.1153791681 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 1A-like [Jatropha curcas]
18 Hb_000025_490 0.1155644804 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Jatropha curcas]
19 Hb_001619_140 0.1192372356 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
20 Hb_120011_010 0.1205458139 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]

Gene co-expression network

sample Hb_005054_330 Hb_005054_330 Hb_007858_020 Hb_007858_020 Hb_005054_330--Hb_007858_020 Hb_167186_010 Hb_167186_010 Hb_005054_330--Hb_167186_010 Hb_000959_240 Hb_000959_240 Hb_005054_330--Hb_000959_240 Hb_008725_220 Hb_008725_220 Hb_005054_330--Hb_008725_220 Hb_000164_160 Hb_000164_160 Hb_005054_330--Hb_000164_160 Hb_003207_230 Hb_003207_230 Hb_005054_330--Hb_003207_230 Hb_004032_220 Hb_004032_220 Hb_007858_020--Hb_004032_220 Hb_124953_010 Hb_124953_010 Hb_007858_020--Hb_124953_010 Hb_007858_020--Hb_000959_240 Hb_000032_150 Hb_000032_150 Hb_007858_020--Hb_000032_150 Hb_007858_020--Hb_167186_010 Hb_167186_010--Hb_008725_220 Hb_167186_010--Hb_000959_240 Hb_000025_490 Hb_000025_490 Hb_167186_010--Hb_000025_490 Hb_002119_030 Hb_002119_030 Hb_167186_010--Hb_002119_030 Hb_000959_240--Hb_008725_220 Hb_101437_010 Hb_101437_010 Hb_000959_240--Hb_101437_010 Hb_000959_240--Hb_000025_490 Hb_008725_220--Hb_000025_490 Hb_008725_220--Hb_101437_010 Hb_001515_040 Hb_001515_040 Hb_008725_220--Hb_001515_040 Hb_002542_030 Hb_002542_030 Hb_000164_160--Hb_002542_030 Hb_004899_010 Hb_004899_010 Hb_000164_160--Hb_004899_010 Hb_002289_180 Hb_002289_180 Hb_000164_160--Hb_002289_180 Hb_000627_130 Hb_000627_130 Hb_000164_160--Hb_000627_130 Hb_008637_020 Hb_008637_020 Hb_000164_160--Hb_008637_020 Hb_003207_230--Hb_124953_010 Hb_003207_230--Hb_000032_150 Hb_099188_010 Hb_099188_010 Hb_003207_230--Hb_099188_010 Hb_047955_010 Hb_047955_010 Hb_003207_230--Hb_047955_010 Hb_000359_230 Hb_000359_230 Hb_003207_230--Hb_000359_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.11569 1083.06 684.769 201.632 1.00547 1.64198
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.48598 5.51055 3.60639 7.21634 20.0761

CAGE analysis