Hb_005085_030

Information

Type -
Description -
Location Contig5085: 48636-49819
Sequence    

Annotation

kegg
ID rcu:RCOM_0495330
description expressed protein, putative
nr
ID XP_012081411.1
description PREDICTED: N-acetyltransferase 9-like protein isoform X1 [Jatropha curcas]
swissprot
ID A7SLC8
description N-acetyltransferase 9-like protein OS=Nematostella vectensis GN=nat9 PE=3 SV=1
trembl
ID A0A067KCC5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18459 PE=4 SV=1
Gene Ontology
ID GO:0008080
description n-acetyltransferase 9-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46213: 16074-49872 , PASA_asmbl_46214: 16074-48695
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005085_030 0.0 - - PREDICTED: N-acetyltransferase 9-like protein isoform X1 [Jatropha curcas]
2 Hb_005679_070 0.1211130593 - - hypothetical protein M569_07741, partial [Genlisea aurea]
3 Hb_004060_030 0.1218977311 - - PREDICTED: primase homolog protein [Jatropha curcas]
4 Hb_152554_010 0.1245407235 - - hypothetical protein B456_008G095800, partial [Gossypium raimondii]
5 Hb_006663_090 0.1304940293 - - hypothetical protein B456_010G1255001, partial [Gossypium raimondii]
6 Hb_007188_020 0.1306889948 - - hypothetical protein PRUPE_ppb010436mg [Prunus persica]
7 Hb_166480_010 0.1320914676 - - PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Cucumis melo]
8 Hb_002784_070 0.1366183712 - - BnaUnng01470D [Brassica napus]
9 Hb_000329_560 0.1401904552 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002482_060 0.1401976859 - - hypothetical protein CICLE_v10033884mg, partial [Citrus clementina]
11 Hb_002783_060 0.1421876942 - - PREDICTED: uncharacterized protein LOC105635325 [Jatropha curcas]
12 Hb_006487_060 0.142692982 - - Defective in cullin neddylation protein, putative [Ricinus communis]
13 Hb_116632_010 0.1429631486 - - unnamed protein product [Vitis vinifera]
14 Hb_007763_060 0.1458006982 - - BnaA02g23510D [Brassica napus]
15 Hb_000810_020 0.146651924 - - -
16 Hb_032927_010 0.1467985987 - - -
17 Hb_136731_010 0.1472996 - - PREDICTED: uncharacterized protein LOC105628378 isoform X4 [Jatropha curcas]
18 Hb_000176_120 0.1506342418 - - seryl-tRNA synthetase, putative [Ricinus communis]
19 Hb_068014_010 0.1514964788 - - hypothetical protein POPTR_0312s00200g, partial [Populus trichocarpa]
20 Hb_000001_040 0.1540386867 - - unnamed protein product [Coffea canephora]

Gene co-expression network

sample Hb_005085_030 Hb_005085_030 Hb_005679_070 Hb_005679_070 Hb_005085_030--Hb_005679_070 Hb_004060_030 Hb_004060_030 Hb_005085_030--Hb_004060_030 Hb_152554_010 Hb_152554_010 Hb_005085_030--Hb_152554_010 Hb_006663_090 Hb_006663_090 Hb_005085_030--Hb_006663_090 Hb_007188_020 Hb_007188_020 Hb_005085_030--Hb_007188_020 Hb_166480_010 Hb_166480_010 Hb_005085_030--Hb_166480_010 Hb_002815_050 Hb_002815_050 Hb_005679_070--Hb_002815_050 Hb_000329_560 Hb_000329_560 Hb_005679_070--Hb_000329_560 Hb_001998_140 Hb_001998_140 Hb_005679_070--Hb_001998_140 Hb_068014_010 Hb_068014_010 Hb_005679_070--Hb_068014_010 Hb_005679_070--Hb_006663_090 Hb_026745_020 Hb_026745_020 Hb_004060_030--Hb_026745_020 Hb_028420_020 Hb_028420_020 Hb_004060_030--Hb_028420_020 Hb_002174_050 Hb_002174_050 Hb_004060_030--Hb_002174_050 Hb_005862_010 Hb_005862_010 Hb_004060_030--Hb_005862_010 Hb_004060_030--Hb_000329_560 Hb_152554_010--Hb_007188_020 Hb_006487_060 Hb_006487_060 Hb_152554_010--Hb_006487_060 Hb_000812_040 Hb_000812_040 Hb_152554_010--Hb_000812_040 Hb_003861_040 Hb_003861_040 Hb_152554_010--Hb_003861_040 Hb_001377_180 Hb_001377_180 Hb_152554_010--Hb_001377_180 Hb_000176_120 Hb_000176_120 Hb_152554_010--Hb_000176_120 Hb_000825_030 Hb_000825_030 Hb_006663_090--Hb_000825_030 Hb_001386_140 Hb_001386_140 Hb_006663_090--Hb_001386_140 Hb_115477_010 Hb_115477_010 Hb_006663_090--Hb_115477_010 Hb_006663_090--Hb_068014_010 Hb_006663_090--Hb_006487_060 Hb_116632_010 Hb_116632_010 Hb_007188_020--Hb_116632_010 Hb_032927_010 Hb_032927_010 Hb_007188_020--Hb_032927_010 Hb_000001_040 Hb_000001_040 Hb_007188_020--Hb_000001_040 Hb_007188_020--Hb_000812_040 Hb_002482_060 Hb_002482_060 Hb_166480_010--Hb_002482_060 Hb_001396_250 Hb_001396_250 Hb_166480_010--Hb_001396_250 Hb_000120_190 Hb_000120_190 Hb_166480_010--Hb_000120_190 Hb_000015_070 Hb_000015_070 Hb_166480_010--Hb_000015_070 Hb_007763_050 Hb_007763_050 Hb_166480_010--Hb_007763_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.57865 1.96645 2.83916 19.3134 4.04433 50.3585
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.6733 14.6412 5.67487 8.9648 6.56165

CAGE analysis