Hb_005144_040

Information

Type -
Description -
Location Contig5144: 35358-40591
Sequence    

Annotation

kegg
ID rcu:RCOM_0473790
description hypothetical protein
nr
ID XP_012064717.1
description PREDICTED: protein N-lysine methyltransferase METTL21A [Jatropha curcas]
swissprot
ID Q8C436
description Protein-lysine methyltransferase METTL21D OS=Mus musculus GN=Vcpkmt PE=2 SV=2
trembl
ID A0A067L9R1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05450 PE=4 SV=1
Gene Ontology
ID GO:0016740
description protein n-lysine methyltransferase mettl21a

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46431: 35563-35699 , PASA_asmbl_46432: 35785-36244 , PASA_asmbl_46433: 36283-40546 , PASA_asmbl_46434: 37974-40546
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005144_040 0.0 - - PREDICTED: protein N-lysine methyltransferase METTL21A [Jatropha curcas]
2 Hb_002270_010 0.0668264797 - - Chaperone protein dnaJ, putative [Ricinus communis]
3 Hb_001498_030 0.0708429051 - - PREDICTED: eukaryotic translation initiation factor 3 subunit E [Populus euphratica]
4 Hb_000076_290 0.0775966708 - - translation factor sui1, putative [Ricinus communis]
5 Hb_000640_210 0.0860872135 - - hypothetical protein JCGZ_14045 [Jatropha curcas]
6 Hb_000174_200 0.0871949663 - - PREDICTED: pre-mRNA-splicing factor 38 [Jatropha curcas]
7 Hb_009404_010 0.0901241747 - - PREDICTED: casein kinase II subunit alpha-2-like [Glycine max]
8 Hb_000331_480 0.0956865311 transcription factor TF Family: GNAT PREDICTED: elongator complex protein 3 [Jatropha curcas]
9 Hb_005147_110 0.0967862818 - - eukaryotic translation elongation factor 1B gamma-subunit [Hevea brasiliensis]
10 Hb_001623_550 0.0976416338 - - PREDICTED: surfeit locus protein 6 [Jatropha curcas]
11 Hb_001227_110 0.0986086362 - - U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis]
12 Hb_001408_090 0.0986152668 - - PREDICTED: uncharacterized protein LOC105629659 [Jatropha curcas]
13 Hb_002133_030 0.0986270392 - - PREDICTED: diphthamide biosynthesis protein 1 [Jatropha curcas]
14 Hb_001969_040 0.0995817176 - - PREDICTED: serine-threonine kinase receptor-associated protein-like [Jatropha curcas]
15 Hb_005314_010 0.10080094 - - nucleotide binding protein, putative [Ricinus communis]
16 Hb_005333_020 0.1008713582 - - PREDICTED: protein CutA, chloroplastic [Jatropha curcas]
17 Hb_000172_550 0.1011216045 transcription factor TF Family: bZIP PREDICTED: transcription factor TGA1-like [Jatropha curcas]
18 Hb_018663_020 0.1015529765 - - PREDICTED: nuclear pore complex protein NUP1 isoform X2 [Jatropha curcas]
19 Hb_004032_350 0.1020941806 - - PREDICTED: splicing factor U2af small subunit B-like isoform X1 [Musa acuminata subsp. malaccensis]
20 Hb_000327_310 0.102689776 - - PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3 [Jatropha curcas]

Gene co-expression network

sample Hb_005144_040 Hb_005144_040 Hb_002270_010 Hb_002270_010 Hb_005144_040--Hb_002270_010 Hb_001498_030 Hb_001498_030 Hb_005144_040--Hb_001498_030 Hb_000076_290 Hb_000076_290 Hb_005144_040--Hb_000076_290 Hb_000640_210 Hb_000640_210 Hb_005144_040--Hb_000640_210 Hb_000174_200 Hb_000174_200 Hb_005144_040--Hb_000174_200 Hb_009404_010 Hb_009404_010 Hb_005144_040--Hb_009404_010 Hb_002270_010--Hb_000076_290 Hb_000172_550 Hb_000172_550 Hb_002270_010--Hb_000172_550 Hb_000735_120 Hb_000735_120 Hb_002270_010--Hb_000735_120 Hb_001439_180 Hb_001439_180 Hb_002270_010--Hb_001439_180 Hb_015401_020 Hb_015401_020 Hb_002270_010--Hb_015401_020 Hb_002133_030 Hb_002133_030 Hb_001498_030--Hb_002133_030 Hb_001969_040 Hb_001969_040 Hb_001498_030--Hb_001969_040 Hb_005725_070 Hb_005725_070 Hb_001498_030--Hb_005725_070 Hb_004724_360 Hb_004724_360 Hb_001498_030--Hb_004724_360 Hb_042083_070 Hb_042083_070 Hb_001498_030--Hb_042083_070 Hb_000076_290--Hb_000174_200 Hb_004032_350 Hb_004032_350 Hb_000076_290--Hb_004032_350 Hb_000076_290--Hb_000640_210 Hb_000076_290--Hb_001439_180 Hb_000076_290--Hb_015401_020 Hb_000322_170 Hb_000322_170 Hb_000640_210--Hb_000322_170 Hb_000640_210--Hb_000174_200 Hb_005028_010 Hb_005028_010 Hb_000640_210--Hb_005028_010 Hb_012760_200 Hb_012760_200 Hb_000640_210--Hb_012760_200 Hb_001178_060 Hb_001178_060 Hb_000640_210--Hb_001178_060 Hb_000174_200--Hb_004032_350 Hb_000174_200--Hb_015401_020 Hb_000174_200--Hb_000322_170 Hb_009404_010--Hb_001969_040 Hb_004324_280 Hb_004324_280 Hb_009404_010--Hb_004324_280 Hb_000462_150 Hb_000462_150 Hb_009404_010--Hb_000462_150 Hb_002818_040 Hb_002818_040 Hb_009404_010--Hb_002818_040 Hb_005147_110 Hb_005147_110 Hb_009404_010--Hb_005147_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
68.6673 29.8148 8.66092 6.94481 39.9621 56.5125
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.7002 13.5627 20.5165 13.0309 3.59621

CAGE analysis