Hb_005144_120

Information

Type -
Description -
Location Contig5144: 88982-91289
Sequence    

Annotation

kegg
ID rcu:RCOM_0474160
description transferase, putative
nr
ID XP_012064709.1
description PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7 [Jatropha curcas]
swissprot
ID Q9ZUV3
description Probable glucuronoxylan glucuronosyltransferase IRX7 OS=Arabidopsis thaliana GN=IRX7 PE=2 SV=1
trembl
ID A0A067L6C3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05444 PE=4 SV=1
Gene Ontology
ID GO:0015020
description probable glucuronoxylan glucuronosyltransferase irx7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46450: 88964-90995
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005144_120 0.0 - - PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7 [Jatropha curcas]
2 Hb_000086_210 0.1329831797 - - ABC transporter family protein [Hevea brasiliensis]
3 Hb_011004_050 0.1376322659 - - PREDICTED: kinesin-13A [Jatropha curcas]
4 Hb_008179_030 0.1398111749 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 8 [Jatropha curcas]
5 Hb_009222_110 0.1402035674 - - PREDICTED: RING-H2 finger protein ATL52-like [Jatropha curcas]
6 Hb_000328_010 0.1404417628 - - PREDICTED: QWRF motif-containing protein 8-like [Jatropha curcas]
7 Hb_005563_010 0.1414602794 - - PREDICTED: kinesin-II 85 kDa subunit isoform X1 [Jatropha curcas]
8 Hb_000388_080 0.1519967862 - - PREDICTED: serine/threonine-protein kinase CDL1 [Jatropha curcas]
9 Hb_000291_290 0.1521963344 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001544_050 0.1549100615 - - PREDICTED: U-box domain-containing protein 11-like [Jatropha curcas]
11 Hb_001195_130 0.1574149305 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000390_210 0.1591947957 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
13 Hb_001017_130 0.1600786875 - - hypothetical protein POPTR_0010s06070g [Populus trichocarpa]
14 Hb_000856_400 0.1601077839 - - PREDICTED: protein IQ-DOMAIN 31-like [Jatropha curcas]
15 Hb_001579_300 0.1617770833 - - PREDICTED: probable polygalacturonase At1g80170 [Jatropha curcas]
16 Hb_000256_080 0.1621138862 - - PREDICTED: deSI-like protein At4g17486 [Jatropha curcas]
17 Hb_143004_020 0.1634066925 - - PREDICTED: phosphopantothenate--cysteine ligase 2-like [Jatropha curcas]
18 Hb_008725_080 0.1634969148 - - PREDICTED: probable galacturonosyltransferase-like 7 [Jatropha curcas]
19 Hb_006925_050 0.1649468955 - - PREDICTED: inactive rhomboid protein 1-like [Jatropha curcas]
20 Hb_003209_010 0.1669844897 - - hypothetical protein POPTR_0010s16880g [Populus trichocarpa]

Gene co-expression network

sample Hb_005144_120 Hb_005144_120 Hb_000086_210 Hb_000086_210 Hb_005144_120--Hb_000086_210 Hb_011004_050 Hb_011004_050 Hb_005144_120--Hb_011004_050 Hb_008179_030 Hb_008179_030 Hb_005144_120--Hb_008179_030 Hb_009222_110 Hb_009222_110 Hb_005144_120--Hb_009222_110 Hb_000328_010 Hb_000328_010 Hb_005144_120--Hb_000328_010 Hb_005563_010 Hb_005563_010 Hb_005144_120--Hb_005563_010 Hb_000139_300 Hb_000139_300 Hb_000086_210--Hb_000139_300 Hb_000152_440 Hb_000152_440 Hb_000086_210--Hb_000152_440 Hb_005074_040 Hb_005074_040 Hb_000086_210--Hb_005074_040 Hb_000749_020 Hb_000749_020 Hb_000086_210--Hb_000749_020 Hb_000086_210--Hb_005563_010 Hb_000935_040 Hb_000935_040 Hb_000086_210--Hb_000935_040 Hb_011004_050--Hb_000152_440 Hb_001579_300 Hb_001579_300 Hb_011004_050--Hb_001579_300 Hb_011004_050--Hb_000086_210 Hb_011004_050--Hb_005563_010 Hb_005496_020 Hb_005496_020 Hb_011004_050--Hb_005496_020 Hb_000390_210 Hb_000390_210 Hb_008179_030--Hb_000390_210 Hb_000322_030 Hb_000322_030 Hb_008179_030--Hb_000322_030 Hb_000140_060 Hb_000140_060 Hb_008179_030--Hb_000140_060 Hb_000099_170 Hb_000099_170 Hb_008179_030--Hb_000099_170 Hb_003664_030 Hb_003664_030 Hb_008179_030--Hb_003664_030 Hb_000069_360 Hb_000069_360 Hb_008179_030--Hb_000069_360 Hb_000300_480 Hb_000300_480 Hb_009222_110--Hb_000300_480 Hb_000056_190 Hb_000056_190 Hb_009222_110--Hb_000056_190 Hb_001195_130 Hb_001195_130 Hb_009222_110--Hb_001195_130 Hb_000856_400 Hb_000856_400 Hb_009222_110--Hb_000856_400 Hb_006925_050 Hb_006925_050 Hb_009222_110--Hb_006925_050 Hb_006153_160 Hb_006153_160 Hb_000328_010--Hb_006153_160 Hb_000193_340 Hb_000193_340 Hb_000328_010--Hb_000193_340 Hb_002498_030 Hb_002498_030 Hb_000328_010--Hb_002498_030 Hb_000328_010--Hb_000086_210 Hb_017439_010 Hb_017439_010 Hb_000328_010--Hb_017439_010 Hb_001976_030 Hb_001976_030 Hb_005563_010--Hb_001976_030 Hb_000049_180 Hb_000049_180 Hb_005563_010--Hb_000049_180 Hb_001369_100 Hb_001369_100 Hb_005563_010--Hb_001369_100 Hb_005563_010--Hb_000139_300 Hb_001628_120 Hb_001628_120 Hb_005563_010--Hb_001628_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.50212 7.58385 50.7519 51.9935 4.12568 1.46065
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.13005 6.97094 8.98116 1.72186 38.912

CAGE analysis