Hb_005162_130

Information

Type -
Description -
Location Contig5162: 91271-93384
Sequence    

Annotation

kegg
ID rcu:RCOM_1582820
description hypothetical protein
nr
ID XP_012090205.1
description PREDICTED: uncharacterized protein LOC105648433 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JEG4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26072 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46528: 91232-93329
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005162_130 0.0 - - PREDICTED: uncharacterized protein LOC105648433 isoform X2 [Jatropha curcas]
2 Hb_000345_410 0.068029296 - - PREDICTED: kinesin-like protein KIFC3 [Jatropha curcas]
3 Hb_002007_280 0.0770719222 - - PREDICTED: kinesin-like protein KIFC3 [Jatropha curcas]
4 Hb_008406_100 0.1085017252 - - PREDICTED: protein TPX2 isoform X2 [Jatropha curcas]
5 Hb_000345_130 0.1194007823 - - unnamed protein product [Coffea canephora]
6 Hb_000349_230 0.1364797828 - - PREDICTED: protein TPX2 [Jatropha curcas]
7 Hb_010998_050 0.1377502008 - - PREDICTED: kinesin-like protein KIF22 isoform X2 [Jatropha curcas]
8 Hb_000321_080 0.1397118552 - - histone H4 [Zea mays]
9 Hb_029510_130 0.1529267461 - - PREDICTED: malonate--CoA ligase [Jatropha curcas]
10 Hb_001501_070 0.1683153761 - - PREDICTED: condensin complex subunit 2 [Jatropha curcas]
11 Hb_011360_130 0.1695470482 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000638_260 0.1700070859 - - hypothetical protein JCGZ_06730 [Jatropha curcas]
13 Hb_005901_030 0.1733429841 - - PREDICTED: phragmoplast orienting kinesin 2 isoform X1 [Jatropha curcas]
14 Hb_000365_210 0.1737254014 - - PREDICTED: cell division control protein 2 homolog C [Jatropha curcas]
15 Hb_000260_650 0.1746969083 - - PREDICTED: protein PFC0760c [Jatropha curcas]
16 Hb_000288_090 0.1749665577 - - unnamed protein product [Vitis vinifera]
17 Hb_010180_030 0.1772908613 - - PREDICTED: WEB family protein At2g38370-like [Jatropha curcas]
18 Hb_024973_020 0.1817880845 - - Protein regulator of cytokinesis, putative [Ricinus communis]
19 Hb_001478_020 0.1839585089 desease resistance Gene Name: AAA thyroid hormone receptor interactor, putative [Ricinus communis]
20 Hb_005725_150 0.1882965127 - - PREDICTED: kinesin-related protein 11 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_005162_130 Hb_005162_130 Hb_000345_410 Hb_000345_410 Hb_005162_130--Hb_000345_410 Hb_002007_280 Hb_002007_280 Hb_005162_130--Hb_002007_280 Hb_008406_100 Hb_008406_100 Hb_005162_130--Hb_008406_100 Hb_000345_130 Hb_000345_130 Hb_005162_130--Hb_000345_130 Hb_000349_230 Hb_000349_230 Hb_005162_130--Hb_000349_230 Hb_010998_050 Hb_010998_050 Hb_005162_130--Hb_010998_050 Hb_000345_410--Hb_002007_280 Hb_000345_410--Hb_008406_100 Hb_000321_080 Hb_000321_080 Hb_000345_410--Hb_000321_080 Hb_000345_410--Hb_010998_050 Hb_000345_410--Hb_000345_130 Hb_002007_280--Hb_000345_130 Hb_002007_280--Hb_008406_100 Hb_002007_280--Hb_000349_230 Hb_029510_130 Hb_029510_130 Hb_002007_280--Hb_029510_130 Hb_024973_020 Hb_024973_020 Hb_008406_100--Hb_024973_020 Hb_000365_210 Hb_000365_210 Hb_008406_100--Hb_000365_210 Hb_001501_070 Hb_001501_070 Hb_008406_100--Hb_001501_070 Hb_000345_130--Hb_000349_230 Hb_000345_130--Hb_010998_050 Hb_036790_030 Hb_036790_030 Hb_000345_130--Hb_036790_030 Hb_000349_230--Hb_010998_050 Hb_000349_230--Hb_000345_410 Hb_000349_230--Hb_029510_130 Hb_010998_050--Hb_036790_030 Hb_010998_050--Hb_002007_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.50167 1.79826 82.4167 24.4104 5.89985 5.98924
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.19233 4.22763 4.19907 6.87561 2.43447

CAGE analysis