Hb_005167_040

Information

Type -
Description -
Location Contig5167: 51475-52545
Sequence    

Annotation

kegg
ID rcu:RCOM_0812160
description triacylglycerol lipase, putative
nr
ID XP_012065096.1
description PREDICTED: phospholipase A1-IIdelta [Jatropha curcas]
swissprot
ID Q9SJI7
description Phospholipase A1-IIdelta OS=Arabidopsis thaliana GN=At2g42690 PE=1 SV=1
trembl
ID A0A067LIA3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22119 PE=4 SV=1
Gene Ontology
ID GO:0006629
description phospholipase a1-iidelta

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005167_040 0.0 - - PREDICTED: phospholipase A1-IIdelta [Jatropha curcas]
2 Hb_001696_030 0.0753071173 - - cytochrome P450, putative [Ricinus communis]
3 Hb_023988_020 0.1252182495 - - PREDICTED: transmembrane protein 19 [Prunus mume]
4 Hb_000258_080 0.1312059549 - - Brassinosteroid LRR receptor kinase precursor, putative [Ricinus communis]
5 Hb_007766_010 0.1420351547 - - hypothetical protein JCGZ_06718 [Jatropha curcas]
6 Hb_000031_030 0.1437627105 - - PREDICTED: plasma membrane ATPase 4 [Jatropha curcas]
7 Hb_000082_080 0.1470558144 - - putative polyol transporter protein 1 [Hevea brasiliensis]
8 Hb_000185_200 0.1501022738 - - PREDICTED: protein trichome birefringence-like 42 [Jatropha curcas]
9 Hb_000258_430 0.1614532147 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
10 Hb_001205_090 0.1621535563 - - PREDICTED: random slug protein 5 [Jatropha curcas]
11 Hb_004659_120 0.1624003249 rubber biosynthesis Gene Name: CPTL PREDICTED: dehydrodolichyl diphosphate syntase complex subunit NUS1 isoform X3 [Jatropha curcas]
12 Hb_001128_060 0.1633994587 - - amino acid permease, putative [Ricinus communis]
13 Hb_135810_010 0.1648707095 - - PREDICTED: phospholipase A1-IIdelta [Jatropha curcas]
14 Hb_006487_050 0.167250026 - - hypothetical protein PHAVU_005G049600g [Phaseolus vulgaris]
15 Hb_001017_090 0.1682658848 - - -
16 Hb_006070_010 0.1705642312 rubber biosynthesis Gene Name: CPT2 cis-prenyltransferase 3 [Hevea brasiliensis]
17 Hb_004143_110 0.1708291637 - - PREDICTED: uncharacterized protein LOC105630719 isoform X2 [Jatropha curcas]
18 Hb_005539_290 0.1723583055 - - unknown [Lotus japonicus]
19 Hb_010483_020 0.1734307107 - - latex allergen [Hevea brasiliensis]
20 Hb_000920_140 0.1739627425 - - annexin [Manihot esculenta]

Gene co-expression network

sample Hb_005167_040 Hb_005167_040 Hb_001696_030 Hb_001696_030 Hb_005167_040--Hb_001696_030 Hb_023988_020 Hb_023988_020 Hb_005167_040--Hb_023988_020 Hb_000258_080 Hb_000258_080 Hb_005167_040--Hb_000258_080 Hb_007766_010 Hb_007766_010 Hb_005167_040--Hb_007766_010 Hb_000031_030 Hb_000031_030 Hb_005167_040--Hb_000031_030 Hb_000082_080 Hb_000082_080 Hb_005167_040--Hb_000082_080 Hb_001696_030--Hb_023988_020 Hb_001696_030--Hb_007766_010 Hb_001205_090 Hb_001205_090 Hb_001696_030--Hb_001205_090 Hb_004659_120 Hb_004659_120 Hb_001696_030--Hb_004659_120 Hb_000376_110 Hb_000376_110 Hb_001696_030--Hb_000376_110 Hb_000920_140 Hb_000920_140 Hb_023988_020--Hb_000920_140 Hb_004032_440 Hb_004032_440 Hb_023988_020--Hb_004032_440 Hb_000184_040 Hb_000184_040 Hb_023988_020--Hb_000184_040 Hb_023988_020--Hb_000376_110 Hb_005271_170 Hb_005271_170 Hb_023988_020--Hb_005271_170 Hb_135810_010 Hb_135810_010 Hb_000258_080--Hb_135810_010 Hb_012390_010 Hb_012390_010 Hb_000258_080--Hb_012390_010 Hb_000258_430 Hb_000258_430 Hb_000258_080--Hb_000258_430 Hb_057183_040 Hb_057183_040 Hb_000258_080--Hb_057183_040 Hb_000258_080--Hb_000031_030 Hb_004724_040 Hb_004724_040 Hb_007766_010--Hb_004724_040 Hb_006070_010 Hb_006070_010 Hb_007766_010--Hb_006070_010 Hb_000481_020 Hb_000481_020 Hb_007766_010--Hb_000481_020 Hb_010483_020 Hb_010483_020 Hb_007766_010--Hb_010483_020 Hb_007766_010--Hb_000258_430 Hb_000364_010 Hb_000364_010 Hb_000031_030--Hb_000364_010 Hb_000204_040 Hb_000204_040 Hb_000031_030--Hb_000204_040 Hb_008511_050 Hb_008511_050 Hb_000031_030--Hb_008511_050 Hb_000236_250 Hb_000236_250 Hb_000031_030--Hb_000236_250 Hb_071736_010 Hb_071736_010 Hb_000031_030--Hb_071736_010 Hb_006487_050 Hb_006487_050 Hb_000031_030--Hb_006487_050 Hb_002154_050 Hb_002154_050 Hb_000082_080--Hb_002154_050 Hb_000082_080--Hb_004659_120 Hb_005539_290 Hb_005539_290 Hb_000082_080--Hb_005539_290 Hb_006831_010 Hb_006831_010 Hb_000082_080--Hb_006831_010 Hb_000082_080--Hb_000184_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
209.008 14.1182 4.3942 147.738 133.277 267.364
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
191.041 72.8589 150.599 15.7995 10.2512

CAGE analysis