Hb_005170_040

Information

Type -
Description -
Location Contig5170: 15873-21390
Sequence    

Annotation

kegg
ID rcu:RCOM_1446770
description zinc finger protein, putative (EC:1.3.1.74)
nr
ID XP_012067302.1
description PREDICTED: probable protein S-acyltransferase 7 [Jatropha curcas]
swissprot
ID Q0WQK2
description Probable protein S-acyltransferase 7 OS=Arabidopsis thaliana GN=PAT07 PE=1 SV=1
trembl
ID A0A067L3M6
description S-acyltransferase OS=Jatropha curcas GN=JCGZ_26831 PE=3 SV=1
Gene Ontology
ID GO:0016021
description probable protein s-acyltransferase 7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46544: 15862-21584
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005170_040 0.0 - - PREDICTED: probable protein S-acyltransferase 7 [Jatropha curcas]
2 Hb_000608_320 0.0638386845 - - PREDICTED: uncharacterized protein LOC105644891 [Jatropha curcas]
3 Hb_003777_310 0.0672264848 - - conserved hypothetical protein [Ricinus communis]
4 Hb_004767_100 0.0684505304 - - eukaryotic translation initiation factor 2c, putative [Ricinus communis]
5 Hb_000318_290 0.0717467156 transcription factor TF Family: B3 PREDICTED: B3 domain-containing transcription factor VRN1 isoform X1 [Jatropha curcas]
6 Hb_007059_010 0.0722183172 - - PREDICTED: uncharacterized protein LOC105642418 [Jatropha curcas]
7 Hb_023344_030 0.0722246712 - - PREDICTED: putative G3BP-like protein [Jatropha curcas]
8 Hb_000205_300 0.0769383208 - - PREDICTED: uncharacterized protein LOC105647767 [Jatropha curcas]
9 Hb_002716_130 0.0821413952 - - PREDICTED: uncharacterized protein LOC105645470 isoform X2 [Jatropha curcas]
10 Hb_002445_120 0.0826886125 - - secretory carrier membrane protein, putative [Ricinus communis]
11 Hb_001047_030 0.0834293031 - - PREDICTED: protein transport protein SEC13 homolog B [Jatropha curcas]
12 Hb_004032_150 0.0881433198 - - PREDICTED: chaperone protein dnaJ 10-like [Jatropha curcas]
13 Hb_001454_130 0.0895047226 - - Xyloglucan 6-xylosyltransferase, putative [Ricinus communis]
14 Hb_000146_050 0.0930277027 - - PREDICTED: protein unc-50 homolog isoform X2 [Gossypium raimondii]
15 Hb_001018_130 0.0944279171 - - PREDICTED: uncharacterized protein LOC105638260 [Jatropha curcas]
16 Hb_004117_130 0.0952928676 - - PREDICTED: uncharacterized protein LOC105649104 [Jatropha curcas]
17 Hb_002067_120 0.0957017851 - - PREDICTED: uncharacterized protein LOC105111554 isoform X1 [Populus euphratica]
18 Hb_021409_020 0.0957275525 - - PREDICTED: protein yippee-like At4g27745 [Malus domestica]
19 Hb_006332_010 0.0963013706 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 isoform X1 [Vitis vinifera]
20 Hb_001301_200 0.0963614055 desease resistance Gene Name: NB-ARC Disease resistance protein RPS2, putative [Ricinus communis]

Gene co-expression network

sample Hb_005170_040 Hb_005170_040 Hb_000608_320 Hb_000608_320 Hb_005170_040--Hb_000608_320 Hb_003777_310 Hb_003777_310 Hb_005170_040--Hb_003777_310 Hb_004767_100 Hb_004767_100 Hb_005170_040--Hb_004767_100 Hb_000318_290 Hb_000318_290 Hb_005170_040--Hb_000318_290 Hb_007059_010 Hb_007059_010 Hb_005170_040--Hb_007059_010 Hb_023344_030 Hb_023344_030 Hb_005170_040--Hb_023344_030 Hb_002027_290 Hb_002027_290 Hb_000608_320--Hb_002027_290 Hb_000608_320--Hb_000318_290 Hb_000608_320--Hb_003777_310 Hb_002716_130 Hb_002716_130 Hb_000608_320--Hb_002716_130 Hb_002811_060 Hb_002811_060 Hb_000608_320--Hb_002811_060 Hb_003777_310--Hb_000318_290 Hb_002445_120 Hb_002445_120 Hb_003777_310--Hb_002445_120 Hb_023001_060 Hb_023001_060 Hb_003777_310--Hb_023001_060 Hb_004032_150 Hb_004032_150 Hb_003777_310--Hb_004032_150 Hb_004767_100--Hb_004032_150 Hb_000608_240 Hb_000608_240 Hb_004767_100--Hb_000608_240 Hb_004767_100--Hb_000318_290 Hb_148644_010 Hb_148644_010 Hb_004767_100--Hb_148644_010 Hb_000205_300 Hb_000205_300 Hb_004767_100--Hb_000205_300 Hb_054865_150 Hb_054865_150 Hb_000318_290--Hb_054865_150 Hb_000318_290--Hb_004032_150 Hb_000120_670 Hb_000120_670 Hb_000318_290--Hb_000120_670 Hb_006827_020 Hb_006827_020 Hb_007059_010--Hb_006827_020 Hb_007317_110 Hb_007317_110 Hb_007059_010--Hb_007317_110 Hb_002783_240 Hb_002783_240 Hb_007059_010--Hb_002783_240 Hb_000538_100 Hb_000538_100 Hb_007059_010--Hb_000538_100 Hb_103012_010 Hb_103012_010 Hb_007059_010--Hb_103012_010 Hb_009775_020 Hb_009775_020 Hb_007059_010--Hb_009775_020 Hb_001301_200 Hb_001301_200 Hb_023344_030--Hb_001301_200 Hb_007163_090 Hb_007163_090 Hb_023344_030--Hb_007163_090 Hb_023344_030--Hb_007059_010 Hb_023344_030--Hb_004032_150 Hb_000051_070 Hb_000051_070 Hb_023344_030--Hb_000051_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
13.5951 10.2846 6.12414 20.0946 19.7099 27.538
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.441 13.0154 16.9059 12.6316 6.4129

CAGE analysis