Hb_005181_140

Information

Type -
Description -
Location Contig5181: 69699-70480
Sequence    

Annotation

kegg
ID tcc:TCM_021360
description hypothetical protein
nr
ID KDP27920.1
description hypothetical protein JCGZ_19000 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K6M2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19000 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005181_140 0.0 - - hypothetical protein JCGZ_19000 [Jatropha curcas]
2 Hb_005833_010 0.1152166493 - - PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Jatropha curcas]
3 Hb_163566_010 0.1170517005 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic isoform X2 [Amborella trichopoda]
4 Hb_004079_070 0.1208779716 - - hypothetical protein JCGZ_07230 [Jatropha curcas]
5 Hb_010577_020 0.1220637413 - - -
6 Hb_000130_460 0.1284852996 - - hypothetical protein JCGZ_15296 [Jatropha curcas]
7 Hb_000358_260 0.1300416968 - - PREDICTED: lachrymatory-factor synthase-like [Vitis vinifera]
8 Hb_126714_010 0.1300436912 - - hypothetical protein CISIN_1g041016mg, partial [Citrus sinensis]
9 Hb_024071_030 0.1324400704 - - hypothetical protein CICLE_v10025479mg [Citrus clementina]
10 Hb_006588_140 0.1325980014 - - PREDICTED: uncharacterized protein LOC104906772 [Beta vulgaris subsp. vulgaris]
11 Hb_009663_020 0.1392031624 - - -
12 Hb_000321_110 0.1393318994 - - Uncharacterized protein TCM_041937 [Theobroma cacao]
13 Hb_000915_170 0.1397896177 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 7 isoform X1 [Vitis vinifera]
14 Hb_001426_020 0.1398100312 - - hypothetical protein CICLE_v10033594mg, partial [Citrus clementina]
15 Hb_001956_130 0.1400743127 - - catalytic, putative [Ricinus communis]
16 Hb_001534_130 0.1402968048 - - PREDICTED: serine carboxypeptidase-like 51 [Jatropha curcas]
17 Hb_056506_040 0.1409130879 - - -
18 Hb_007625_010 0.1425767723 - - conserved hypothetical protein [Ricinus communis]
19 Hb_016734_100 0.1435730195 - - -
20 Hb_000487_080 0.1436494924 - - PREDICTED: probable potassium transporter 13 [Jatropha curcas]

Gene co-expression network

sample Hb_005181_140 Hb_005181_140 Hb_005833_010 Hb_005833_010 Hb_005181_140--Hb_005833_010 Hb_163566_010 Hb_163566_010 Hb_005181_140--Hb_163566_010 Hb_004079_070 Hb_004079_070 Hb_005181_140--Hb_004079_070 Hb_010577_020 Hb_010577_020 Hb_005181_140--Hb_010577_020 Hb_000130_460 Hb_000130_460 Hb_005181_140--Hb_000130_460 Hb_000358_260 Hb_000358_260 Hb_005181_140--Hb_000358_260 Hb_126714_010 Hb_126714_010 Hb_005833_010--Hb_126714_010 Hb_005833_010--Hb_163566_010 Hb_006588_140 Hb_006588_140 Hb_005833_010--Hb_006588_140 Hb_005833_010--Hb_010577_020 Hb_005833_010--Hb_000358_260 Hb_001426_020 Hb_001426_020 Hb_005833_010--Hb_001426_020 Hb_009663_020 Hb_009663_020 Hb_163566_010--Hb_009663_020 Hb_016734_100 Hb_016734_100 Hb_163566_010--Hb_016734_100 Hb_163566_010--Hb_001426_020 Hb_024071_030 Hb_024071_030 Hb_163566_010--Hb_024071_030 Hb_000487_080 Hb_000487_080 Hb_163566_010--Hb_000487_080 Hb_011549_040 Hb_011549_040 Hb_004079_070--Hb_011549_040 Hb_000933_030 Hb_000933_030 Hb_004079_070--Hb_000933_030 Hb_000815_050 Hb_000815_050 Hb_004079_070--Hb_000815_050 Hb_000816_140 Hb_000816_140 Hb_004079_070--Hb_000816_140 Hb_068804_190 Hb_068804_190 Hb_004079_070--Hb_068804_190 Hb_166360_010 Hb_166360_010 Hb_004079_070--Hb_166360_010 Hb_056506_040 Hb_056506_040 Hb_010577_020--Hb_056506_040 Hb_010577_020--Hb_000358_260 Hb_010577_020--Hb_011549_040 Hb_010577_020--Hb_068804_190 Hb_000111_490 Hb_000111_490 Hb_010577_020--Hb_000111_490 Hb_003894_110 Hb_003894_110 Hb_000130_460--Hb_003894_110 Hb_009486_050 Hb_009486_050 Hb_000130_460--Hb_009486_050 Hb_001021_120 Hb_001021_120 Hb_000130_460--Hb_001021_120 Hb_152910_050 Hb_152910_050 Hb_000130_460--Hb_152910_050 Hb_017434_010 Hb_017434_010 Hb_000130_460--Hb_017434_010 Hb_003376_020 Hb_003376_020 Hb_000130_460--Hb_003376_020 Hb_000915_170 Hb_000915_170 Hb_000358_260--Hb_000915_170 Hb_000358_260--Hb_056506_040 Hb_000928_030 Hb_000928_030 Hb_000358_260--Hb_000928_030 Hb_006816_380 Hb_006816_380 Hb_000358_260--Hb_006816_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 2.24393 2.89454 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.183203 0 0 2.0925

CAGE analysis