Hb_005181_170

Information

Type -
Description -
Location Contig5181: 80338-84422
Sequence    

Annotation

kegg
ID rcu:RCOM_1000480
description aldehyde dehydrogenase, putative (EC:1.2.1.3)
nr
ID XP_012084088.1
description PREDICTED: aldehyde dehydrogenase 22A1 [Jatropha curcas]
swissprot
ID Q0WSF1
description Aldehyde dehydrogenase 22A1 OS=Arabidopsis thaliana GN=ALDH22A1 PE=2 SV=2
trembl
ID A0A067JYP9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19003 PE=3 SV=1
Gene Ontology
ID GO:0005783
description aldehyde dehydrogenase 22a1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005181_170 0.0 - - PREDICTED: aldehyde dehydrogenase 22A1 [Jatropha curcas]
2 Hb_000112_080 0.0623437625 - - PREDICTED: glutamate receptor 2.1-like [Populus euphratica]
3 Hb_007218_040 0.086732184 - - Leucine-rich repeat transmembrane protein kinase protein, putative [Theobroma cacao]
4 Hb_000297_210 0.0893036723 - - Bipolar kinesin KRP-130, putative [Ricinus communis]
5 Hb_001140_300 0.0909649691 - - PREDICTED: tubulin beta-1 chain [Cicer arietinum]
6 Hb_004122_010 0.0974786572 - - PREDICTED: uncharacterized protein LOC105630923 [Jatropha curcas]
7 Hb_001396_030 0.0982140636 - - hypothetical protein POPTR_0001s13520g [Populus trichocarpa]
8 Hb_000418_110 0.1012041305 - - PREDICTED: protein kinase PINOID [Jatropha curcas]
9 Hb_004330_040 0.1025348162 - - conserved hypothetical protein [Ricinus communis]
10 Hb_004037_040 0.103319968 - - PREDICTED: putative glucose-6-phosphate 1-epimerase [Jatropha curcas]
11 Hb_009767_060 0.1038029785 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]
12 Hb_001514_030 0.1042874945 - - PREDICTED: cyclin-D3-3-like [Jatropha curcas]
13 Hb_002045_010 0.1043945791 - - PREDICTED: F-box/LRR-repeat protein 17 [Jatropha curcas]
14 Hb_127839_010 0.1056734953 - - hypothetical protein PRUPE_ppa000956mg [Prunus persica]
15 Hb_001007_020 0.1064272884 - - PREDICTED: bidirectional sugar transporter SWEET1 isoform X2 [Jatropha curcas]
16 Hb_005675_050 0.1076316574 - - alpha-glucosidase, putative [Ricinus communis]
17 Hb_168918_010 0.1091951103 - - pectin acetylesterase, putative [Ricinus communis]
18 Hb_007632_160 0.1121764339 - - conserved hypothetical protein [Ricinus communis]
19 Hb_007632_070 0.1142302361 - - kinase, putative [Ricinus communis]
20 Hb_032572_010 0.1150715977 - - PREDICTED: phospholipase A2-alpha [Jatropha curcas]

Gene co-expression network

sample Hb_005181_170 Hb_005181_170 Hb_000112_080 Hb_000112_080 Hb_005181_170--Hb_000112_080 Hb_007218_040 Hb_007218_040 Hb_005181_170--Hb_007218_040 Hb_000297_210 Hb_000297_210 Hb_005181_170--Hb_000297_210 Hb_001140_300 Hb_001140_300 Hb_005181_170--Hb_001140_300 Hb_004122_010 Hb_004122_010 Hb_005181_170--Hb_004122_010 Hb_001396_030 Hb_001396_030 Hb_005181_170--Hb_001396_030 Hb_000112_080--Hb_001396_030 Hb_000112_080--Hb_007218_040 Hb_015048_020 Hb_015048_020 Hb_000112_080--Hb_015048_020 Hb_000112_080--Hb_001140_300 Hb_000003_750 Hb_000003_750 Hb_000112_080--Hb_000003_750 Hb_007218_040--Hb_001140_300 Hb_007218_040--Hb_001396_030 Hb_168918_010 Hb_168918_010 Hb_007218_040--Hb_168918_010 Hb_007811_020 Hb_007811_020 Hb_007218_040--Hb_007811_020 Hb_004435_020 Hb_004435_020 Hb_007218_040--Hb_004435_020 Hb_000297_210--Hb_004122_010 Hb_007632_160 Hb_007632_160 Hb_000297_210--Hb_007632_160 Hb_001348_100 Hb_001348_100 Hb_000297_210--Hb_001348_100 Hb_005675_050 Hb_005675_050 Hb_000297_210--Hb_005675_050 Hb_005276_190 Hb_005276_190 Hb_000297_210--Hb_005276_190 Hb_025787_020 Hb_025787_020 Hb_001140_300--Hb_025787_020 Hb_001056_040 Hb_001056_040 Hb_001140_300--Hb_001056_040 Hb_007632_070 Hb_007632_070 Hb_001140_300--Hb_007632_070 Hb_001140_300--Hb_001396_030 Hb_004122_010--Hb_005675_050 Hb_001514_030 Hb_001514_030 Hb_004122_010--Hb_001514_030 Hb_004122_010--Hb_007632_160 Hb_004122_010--Hb_168918_010 Hb_085962_010 Hb_085962_010 Hb_001396_030--Hb_085962_010 Hb_027506_030 Hb_027506_030 Hb_001396_030--Hb_027506_030 Hb_000303_060 Hb_000303_060 Hb_001396_030--Hb_000303_060 Hb_005542_120 Hb_005542_120 Hb_001396_030--Hb_005542_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.013879 0.304953 0.344854 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0600897 0.124634

CAGE analysis