Hb_005183_160

Information

Type -
Description -
Location Contig5183: 108666-109070
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005183_160 0.0 - - -
2 Hb_004304_050 0.0044960528 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
3 Hb_003918_040 0.0063864192 - - -
4 Hb_008880_010 0.1324603948 - - PREDICTED: receptor-like serine/threonine-protein kinase SD1-8 isoform X2 [Nelumbo nucifera]
5 Hb_061390_010 0.1325890806 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
6 Hb_115350_010 0.1341203874 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
7 Hb_002779_020 0.1345681774 - - transcription factor, putative [Ricinus communis]
8 Hb_136696_010 0.1353999427 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
9 Hb_068804_160 0.1480087758 transcription factor TF Family: MIKC hypothetical protein JCGZ_12632 [Jatropha curcas]
10 Hb_000215_170 0.2758049906 - - PREDICTED: uncharacterized protein LOC102596491 [Solanum tuberosum]
11 Hb_001798_050 0.3142781374 transcription factor TF Family: NAC NAC transcription factor 057 [Jatropha curcas]
12 Hb_010504_010 0.316864742 - - 40S ribosomal protein S15C [Hevea brasiliensis]
13 Hb_001824_060 0.3261573741 - - -
14 Hb_000011_170 0.3391838011 - - PREDICTED: uncharacterized protein LOC105631661 [Jatropha curcas]
15 Hb_002307_130 0.3700788996 - - conserved hypothetical protein [Ricinus communis]
16 Hb_153231_040 0.3747077557 - - -
17 Hb_004147_040 0.3830134631 - - hypothetical protein JCGZ_15918 [Jatropha curcas]
18 Hb_004631_120 0.4008621103 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002239_010 0.4008943155 - - -
20 Hb_001787_040 0.4124141894 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]

Gene co-expression network

sample Hb_005183_160 Hb_005183_160 Hb_004304_050 Hb_004304_050 Hb_005183_160--Hb_004304_050 Hb_003918_040 Hb_003918_040 Hb_005183_160--Hb_003918_040 Hb_008880_010 Hb_008880_010 Hb_005183_160--Hb_008880_010 Hb_061390_010 Hb_061390_010 Hb_005183_160--Hb_061390_010 Hb_115350_010 Hb_115350_010 Hb_005183_160--Hb_115350_010 Hb_002779_020 Hb_002779_020 Hb_005183_160--Hb_002779_020 Hb_004304_050--Hb_003918_040 Hb_004304_050--Hb_008880_010 Hb_004304_050--Hb_061390_010 Hb_004304_050--Hb_115350_010 Hb_004304_050--Hb_002779_020 Hb_003918_040--Hb_008880_010 Hb_003918_040--Hb_061390_010 Hb_003918_040--Hb_115350_010 Hb_003918_040--Hb_002779_020 Hb_008880_010--Hb_061390_010 Hb_008880_010--Hb_115350_010 Hb_008880_010--Hb_002779_020 Hb_136696_010 Hb_136696_010 Hb_008880_010--Hb_136696_010 Hb_068804_160 Hb_068804_160 Hb_008880_010--Hb_068804_160 Hb_061390_010--Hb_115350_010 Hb_061390_010--Hb_002779_020 Hb_061390_010--Hb_136696_010 Hb_061390_010--Hb_068804_160 Hb_115350_010--Hb_002779_020 Hb_115350_010--Hb_136696_010 Hb_115350_010--Hb_068804_160 Hb_002779_020--Hb_136696_010 Hb_002779_020--Hb_068804_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.37031 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.440015 0 0 0 0

CAGE analysis