Hb_005188_090

Information

Type -
Description -
Location Contig5188: 92849-96322
Sequence    

Annotation

kegg
ID tcc:TCM_019017
description Phosphoinositide 4-kinase gamma 7, gamma 7,ubdk gamma 7,pi4k gamma 7 isoform 1
nr
ID XP_012088103.1
description PREDICTED: phosphatidylinositol 4-kinase gamma 7-like [Jatropha curcas]
swissprot
ID Q9SI52
description Phosphatidylinositol 4-kinase gamma 7 OS=Arabidopsis thaliana GN=PI4KG7 PE=1 SV=2
trembl
ID A0A067JXQ7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25620 PE=4 SV=1
Gene Ontology
ID GO:0004430
description phosphatidylinositol 4-kinase gamma 7-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46640: 93332-94173 , PASA_asmbl_46642: 94433-96359
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005188_090 0.0 - - PREDICTED: phosphatidylinositol 4-kinase gamma 7-like [Jatropha curcas]
2 Hb_000172_560 0.0844654659 - - PREDICTED: pentatricopeptide repeat-containing protein At4g02750 [Jatropha curcas]
3 Hb_002603_160 0.0887366731 - - Arginyl-tRNA--protein transferase, putative [Ricinus communis]
4 Hb_000236_140 0.0935608636 - - PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like [Jatropha curcas]
5 Hb_005043_010 0.1020702704 - - calcium ion binding protein, putative [Ricinus communis]
6 Hb_007416_270 0.1038326232 - - PREDICTED: uncharacterized protein LOC105637478 [Jatropha curcas]
7 Hb_003687_100 0.111763601 - - PREDICTED: putative pentatricopeptide repeat-containing protein At3g23330 [Jatropha curcas]
8 Hb_000865_060 0.1121470595 transcription factor TF Family: FAR1 hypothetical protein CISIN_1g043648mg [Citrus sinensis]
9 Hb_001493_180 0.1143602825 - - fyve finger-containing phosphoinositide kinase, fyv1, putative [Ricinus communis]
10 Hb_003551_050 0.1168524155 - - PREDICTED: mitochondrial fission 1 protein A [Jatropha curcas]
11 Hb_001090_050 0.119496625 - - PREDICTED: mediator of RNA polymerase II transcription subunit 1 isoform X1 [Jatropha curcas]
12 Hb_001073_050 0.1198768989 - - -
13 Hb_005701_010 0.1209394464 - - PREDICTED: uncharacterized protein LOC105633877 isoform X1 [Jatropha curcas]
14 Hb_000260_570 0.1235244595 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
15 Hb_000359_010 0.1235736251 - - o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis]
16 Hb_000563_550 0.1257526746 - - PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Jatropha curcas]
17 Hb_001811_030 0.1262377747 - - Beta-ureidopropionase, putative [Ricinus communis]
18 Hb_000327_220 0.1263897266 - - PREDICTED: probable protein phosphatase 2C 38 [Jatropha curcas]
19 Hb_001454_190 0.1277981978 - - PREDICTED: pentatricopeptide repeat-containing protein At3g06920 [Jatropha curcas]
20 Hb_002756_020 0.1298717482 transcription factor TF Family: HB bel1 homeotic protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_005188_090 Hb_005188_090 Hb_000172_560 Hb_000172_560 Hb_005188_090--Hb_000172_560 Hb_002603_160 Hb_002603_160 Hb_005188_090--Hb_002603_160 Hb_000236_140 Hb_000236_140 Hb_005188_090--Hb_000236_140 Hb_005043_010 Hb_005043_010 Hb_005188_090--Hb_005043_010 Hb_007416_270 Hb_007416_270 Hb_005188_090--Hb_007416_270 Hb_003687_100 Hb_003687_100 Hb_005188_090--Hb_003687_100 Hb_000172_560--Hb_000236_140 Hb_000172_560--Hb_007416_270 Hb_000479_130 Hb_000479_130 Hb_000172_560--Hb_000479_130 Hb_001189_050 Hb_001189_050 Hb_000172_560--Hb_001189_050 Hb_000172_560--Hb_003687_100 Hb_131864_040 Hb_131864_040 Hb_002603_160--Hb_131864_040 Hb_003018_190 Hb_003018_190 Hb_002603_160--Hb_003018_190 Hb_006846_110 Hb_006846_110 Hb_002603_160--Hb_006846_110 Hb_000223_150 Hb_000223_150 Hb_002603_160--Hb_000223_150 Hb_001141_280 Hb_001141_280 Hb_002603_160--Hb_001141_280 Hb_000236_140--Hb_003687_100 Hb_004128_180 Hb_004128_180 Hb_000236_140--Hb_004128_180 Hb_000236_140--Hb_007416_270 Hb_000236_140--Hb_000479_130 Hb_007075_050 Hb_007075_050 Hb_000236_140--Hb_007075_050 Hb_000563_550 Hb_000563_550 Hb_005043_010--Hb_000563_550 Hb_005043_010--Hb_007416_270 Hb_005043_010--Hb_000236_140 Hb_005043_010--Hb_000172_560 Hb_000705_240 Hb_000705_240 Hb_005043_010--Hb_000705_240 Hb_001002_030 Hb_001002_030 Hb_007416_270--Hb_001002_030 Hb_007416_270--Hb_003687_100 Hb_000865_060 Hb_000865_060 Hb_007416_270--Hb_000865_060 Hb_007416_270--Hb_000479_130 Hb_008695_210 Hb_008695_210 Hb_007416_270--Hb_008695_210 Hb_000635_220 Hb_000635_220 Hb_003687_100--Hb_000635_220 Hb_002496_040 Hb_002496_040 Hb_003687_100--Hb_002496_040 Hb_003687_100--Hb_007075_050 Hb_000343_130 Hb_000343_130 Hb_003687_100--Hb_000343_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.9492 11.7503 4.78244 13.9428 28.8307 37.3335
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
38.373 38.4857 113.489 29.8002 20.5597

CAGE analysis