Hb_005203_050

Information

Type -
Description -
Location Contig5203: 77310-77423
Sequence    

Annotation

kegg
ID pop:POPTR_0016s01740g
description POPTRDRAFT_575969; hypothetical protein
nr
ID AFD61601.1
description anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
swissprot
ID Q40284
description Anthocyanidin 3-O-glucosyltransferase 1 OS=Manihot esculenta GN=GT1 PE=2 SV=1
trembl
ID H9BMN5
description Anthocyanidin 3-O-glucosyltransferase OS=Hevea brasiliensis GN=ANGT1 PE=2 SV=1
Gene Ontology
ID GO:0047213
description anthocyanidin 3-o-glucosyltransferase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005203_050 0.0 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
2 Hb_000062_500 0.2044834712 - - PREDICTED: urease-like [Zea mays]
3 Hb_032018_010 0.2087979753 - - PREDICTED: uncharacterized protein LOC105778873 [Gossypium raimondii]
4 Hb_033926_010 0.2122143218 - - -
5 Hb_009189_030 0.2149446143 - - hypothetical protein PRUPE_ppa023969mg, partial [Prunus persica]
6 Hb_009922_010 0.2373695188 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
7 Hb_053643_010 0.2387630572 - - Zinc finger protein GIS2 [Medicago truncatula]
8 Hb_061365_010 0.2407136526 - - PREDICTED: uncharacterized protein LOC104227769, partial [Nicotiana sylvestris]
9 Hb_041237_010 0.242726894 - - conserved hypothetical protein [Ricinus communis]
10 Hb_082945_020 0.2459242685 - - PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Jatropha curcas]
11 Hb_003816_020 0.2482784355 - - hypothetical protein POPTR_0017s05940g [Populus trichocarpa]
12 Hb_137515_010 0.2483846125 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X1 [Populus euphratica]
13 Hb_093432_020 0.2520734046 - - PREDICTED: QWRF motif-containing protein 3 [Jatropha curcas]
14 Hb_007978_020 0.2523020588 transcription factor TF Family: bZIP PREDICTED: transcription factor TGA1-like [Jatropha curcas]
15 Hb_003398_010 0.2577751043 - - PREDICTED: uncharacterized protein At4g02000-like [Eucalyptus grandis]
16 Hb_003337_070 0.260439977 - - PREDICTED: probable esterase KAI2 [Jatropha curcas]
17 Hb_002928_070 0.2612727812 - - -
18 Hb_004939_020 0.2657065716 - - gag/pol protein [Bryonia dioica]
19 Hb_004631_160 0.2663608782 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Jatropha curcas]
20 Hb_000014_130 0.2729082561 - - PREDICTED: uncharacterized protein LOC104219776 [Nicotiana sylvestris]

Gene co-expression network

sample Hb_005203_050 Hb_005203_050 Hb_000062_500 Hb_000062_500 Hb_005203_050--Hb_000062_500 Hb_032018_010 Hb_032018_010 Hb_005203_050--Hb_032018_010 Hb_033926_010 Hb_033926_010 Hb_005203_050--Hb_033926_010 Hb_009189_030 Hb_009189_030 Hb_005203_050--Hb_009189_030 Hb_009922_010 Hb_009922_010 Hb_005203_050--Hb_009922_010 Hb_053643_010 Hb_053643_010 Hb_005203_050--Hb_053643_010 Hb_000062_500--Hb_032018_010 Hb_003772_020 Hb_003772_020 Hb_000062_500--Hb_003772_020 Hb_007978_020 Hb_007978_020 Hb_000062_500--Hb_007978_020 Hb_000014_130 Hb_000014_130 Hb_000062_500--Hb_000014_130 Hb_167316_010 Hb_167316_010 Hb_000062_500--Hb_167316_010 Hb_002837_090 Hb_002837_090 Hb_032018_010--Hb_002837_090 Hb_032018_010--Hb_000014_130 Hb_032018_010--Hb_003772_020 Hb_000317_090 Hb_000317_090 Hb_032018_010--Hb_000317_090 Hb_000181_440 Hb_000181_440 Hb_033926_010--Hb_000181_440 Hb_007223_010 Hb_007223_010 Hb_033926_010--Hb_007223_010 Hb_033926_010--Hb_009189_030 Hb_009372_010 Hb_009372_010 Hb_033926_010--Hb_009372_010 Hb_082945_020 Hb_082945_020 Hb_033926_010--Hb_082945_020 Hb_003222_010 Hb_003222_010 Hb_009189_030--Hb_003222_010 Hb_027255_010 Hb_027255_010 Hb_009189_030--Hb_027255_010 Hb_000205_070 Hb_000205_070 Hb_009189_030--Hb_000205_070 Hb_000853_290 Hb_000853_290 Hb_009189_030--Hb_000853_290 Hb_004631_160 Hb_004631_160 Hb_009189_030--Hb_004631_160 Hb_003337_070 Hb_003337_070 Hb_009189_030--Hb_003337_070 Hb_009922_010--Hb_053643_010 Hb_093432_020 Hb_093432_020 Hb_009922_010--Hb_093432_020 Hb_002928_070 Hb_002928_070 Hb_009922_010--Hb_002928_070 Hb_061365_010 Hb_061365_010 Hb_009922_010--Hb_061365_010 Hb_137515_010 Hb_137515_010 Hb_009922_010--Hb_137515_010 Hb_053643_010--Hb_093432_020 Hb_053643_010--Hb_002928_070 Hb_053643_010--Hb_061365_010 Hb_053643_010--Hb_137515_010 Hb_001279_230 Hb_001279_230 Hb_053643_010--Hb_001279_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7825.45 42410.8 1513.93 1460.23 28143.8 43762.7
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1027.99 0 0 64.9617 0

CAGE analysis