Hb_005211_170

Information

Type -
Description -
Location Contig5211: 156325-157779
Sequence    

Annotation

kegg
ID pop:POPTR_0010s13830g
description POPTRDRAFT_566655; aspartyl protease family protein
nr
ID XP_012082051.1
description PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
swissprot
ID Q9LS40
description Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1
trembl
ID A0A067K2W2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18299 PE=4 SV=1
Gene Ontology
ID GO:0004190
description protein aspartic protease in guard cell 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005211_170 0.0 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
2 Hb_002307_150 0.0432120704 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA4-like [Jatropha curcas]
3 Hb_000333_140 0.0680597161 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
4 Hb_010080_050 0.0692412484 - - PREDICTED: uncharacterized protein LOC105635251 [Jatropha curcas]
5 Hb_000445_260 0.0787601838 - - PREDICTED: uncharacterized protein LOC105127729 [Populus euphratica]
6 Hb_000310_040 0.0847986187 - - PREDICTED: adenine phosphoribosyltransferase 3 [Jatropha curcas]
7 Hb_011628_010 0.0860539802 - - tonoplast intrinsic protein, putative [Ricinus communis]
8 Hb_002028_270 0.090576244 - - Pectinesterase-1 precursor, putative [Ricinus communis]
9 Hb_001136_080 0.0953133965 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
10 Hb_001971_040 0.095337932 - - PREDICTED: beta-glucosidase 44-like [Jatropha curcas]
11 Hb_043552_010 0.0986264654 - - PREDICTED: pectinesterase/pectinesterase inhibitor PPE8B isoform X1 [Jatropha curcas]
12 Hb_001856_210 0.0991253632 - - PREDICTED: uncharacterized protein LOC105644171 [Jatropha curcas]
13 Hb_000289_020 0.0996830395 - - hypothetical protein CICLE_v10009323mg [Citrus clementina]
14 Hb_009252_080 0.1005265108 - - Polygalacturonase-1 non-catalytic subunit beta precursor, putative [Ricinus communis]
15 Hb_004319_010 0.1030834363 - - PREDICTED: peroxidase 63-like [Jatropha curcas]
16 Hb_003464_010 0.1031488754 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001709_090 0.1072629089 - - PREDICTED: uncharacterized protein At3g28850-like [Jatropha curcas]
18 Hb_001141_440 0.1089788079 - - PREDICTED: uncharacterized protein LOC105631977 [Jatropha curcas]
19 Hb_000878_080 0.1114516484 - - PREDICTED: uncharacterized protein LOC105635777 [Jatropha curcas]
20 Hb_007290_040 0.1127006921 - - PREDICTED: histidine-containing phosphotransfer protein 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_005211_170 Hb_005211_170 Hb_002307_150 Hb_002307_150 Hb_005211_170--Hb_002307_150 Hb_000333_140 Hb_000333_140 Hb_005211_170--Hb_000333_140 Hb_010080_050 Hb_010080_050 Hb_005211_170--Hb_010080_050 Hb_000445_260 Hb_000445_260 Hb_005211_170--Hb_000445_260 Hb_000310_040 Hb_000310_040 Hb_005211_170--Hb_000310_040 Hb_011628_010 Hb_011628_010 Hb_005211_170--Hb_011628_010 Hb_002307_150--Hb_010080_050 Hb_002307_150--Hb_000333_140 Hb_002307_150--Hb_011628_010 Hb_001971_040 Hb_001971_040 Hb_002307_150--Hb_001971_040 Hb_002028_270 Hb_002028_270 Hb_002307_150--Hb_002028_270 Hb_000333_140--Hb_011628_010 Hb_001136_080 Hb_001136_080 Hb_000333_140--Hb_001136_080 Hb_015292_020 Hb_015292_020 Hb_000333_140--Hb_015292_020 Hb_000333_140--Hb_000310_040 Hb_010080_050--Hb_000445_260 Hb_010080_050--Hb_001971_040 Hb_001856_210 Hb_001856_210 Hb_010080_050--Hb_001856_210 Hb_089140_070 Hb_089140_070 Hb_010080_050--Hb_089140_070 Hb_000445_260--Hb_001856_210 Hb_003464_010 Hb_003464_010 Hb_000445_260--Hb_003464_010 Hb_000445_260--Hb_002307_150 Hb_000878_080 Hb_000878_080 Hb_000445_260--Hb_000878_080 Hb_039075_010 Hb_039075_010 Hb_000310_040--Hb_039075_010 Hb_030360_010 Hb_030360_010 Hb_000310_040--Hb_030360_010 Hb_004732_070 Hb_004732_070 Hb_000310_040--Hb_004732_070 Hb_000861_060 Hb_000861_060 Hb_000310_040--Hb_000861_060 Hb_011628_010--Hb_001136_080 Hb_009367_070 Hb_009367_070 Hb_011628_010--Hb_009367_070 Hb_011628_010--Hb_039075_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.056777 0.489539 4.50072 7.40294 0.0265876 0.014299
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.355664 0.638013

CAGE analysis