Hb_005245_090

Information

Type -
Description -
Location Contig5245: 94824-98441
Sequence    

Annotation

kegg
ID cic:CICLE_v10016105mg
description hypothetical protein
nr
ID XP_012084252.1
description PREDICTED: peroxisomal membrane protein 13 [Jatropha curcas]
swissprot
ID Q9SRR0
description Peroxisomal membrane protein 13 OS=Arabidopsis thaliana GN=PEX13 PE=1 SV=1
trembl
ID A0A067L9Q2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15046 PE=4 SV=1
Gene Ontology
ID GO:0005622
description peroxisomal membrane protein 13

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005245_090 0.0 - - PREDICTED: peroxisomal membrane protein 13 [Jatropha curcas]
2 Hb_000771_140 0.0714828803 - - PREDICTED: abscisic acid receptor PYL8 [Jatropha curcas]
3 Hb_005941_010 0.0892351437 - - PREDICTED: protein SAND [Jatropha curcas]
4 Hb_004242_100 0.0903526959 - - RNA binding protein, putative [Ricinus communis]
5 Hb_098709_010 0.0925435967 - - PREDICTED: protein argonaute 1 [Jatropha curcas]
6 Hb_026048_090 0.0926326408 - - conserved hypothetical protein [Ricinus communis]
7 Hb_009510_030 0.0934855238 - - PREDICTED: phosphoinositide phospholipase C 2-like [Jatropha curcas]
8 Hb_000387_080 0.0938276375 - - PREDICTED: protein IQ-DOMAIN 1 isoform X2 [Jatropha curcas]
9 Hb_000057_060 0.0956325789 - - PREDICTED: uncharacterized protein LOC105634990 isoform X4 [Jatropha curcas]
10 Hb_001017_090 0.096462482 - - -
11 Hb_006787_040 0.0967821982 - - polyadenylate-binding protein, putative [Ricinus communis]
12 Hb_003050_040 0.0993254473 desease resistance Gene Name: AAA Katanin p60 ATPase-containing subunit, putative [Ricinus communis]
13 Hb_000442_030 0.1035209109 - - conserved hypothetical protein [Ricinus communis]
14 Hb_002374_340 0.103756122 - - Two-component response regulator ARR9, putative [Ricinus communis]
15 Hb_114684_020 0.1038736676 - - beta-1,3-glucanase [Hevea brasiliensis]
16 Hb_002942_030 0.1049636902 - - hypothetical protein EUGRSUZ_K000651 [Eucalyptus grandis]
17 Hb_000304_020 0.1057832162 - - beta-1,3-glucanase form RRII Gln 3 [Hevea brasiliensis]
18 Hb_001366_220 0.1064242601 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000696_110 0.1077740458 - - PREDICTED: la-related protein 1C-like isoform X1 [Jatropha curcas]
20 Hb_001433_170 0.1080828333 - - PREDICTED: topless-related protein 3 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_005245_090 Hb_005245_090 Hb_000771_140 Hb_000771_140 Hb_005245_090--Hb_000771_140 Hb_005941_010 Hb_005941_010 Hb_005245_090--Hb_005941_010 Hb_004242_100 Hb_004242_100 Hb_005245_090--Hb_004242_100 Hb_098709_010 Hb_098709_010 Hb_005245_090--Hb_098709_010 Hb_026048_090 Hb_026048_090 Hb_005245_090--Hb_026048_090 Hb_009510_030 Hb_009510_030 Hb_005245_090--Hb_009510_030 Hb_000771_140--Hb_009510_030 Hb_000057_060 Hb_000057_060 Hb_000771_140--Hb_000057_060 Hb_000771_140--Hb_026048_090 Hb_001433_170 Hb_001433_170 Hb_000771_140--Hb_001433_170 Hb_000387_080 Hb_000387_080 Hb_000771_140--Hb_000387_080 Hb_000152_140 Hb_000152_140 Hb_005941_010--Hb_000152_140 Hb_005941_010--Hb_004242_100 Hb_003050_040 Hb_003050_040 Hb_005941_010--Hb_003050_040 Hb_000696_110 Hb_000696_110 Hb_005941_010--Hb_000696_110 Hb_000984_190 Hb_000984_190 Hb_005941_010--Hb_000984_190 Hb_004072_010 Hb_004072_010 Hb_004242_100--Hb_004072_010 Hb_004242_100--Hb_003050_040 Hb_002263_010 Hb_002263_010 Hb_004242_100--Hb_002263_010 Hb_000705_260 Hb_000705_260 Hb_004242_100--Hb_000705_260 Hb_000365_360 Hb_000365_360 Hb_098709_010--Hb_000365_360 Hb_001437_040 Hb_001437_040 Hb_098709_010--Hb_001437_040 Hb_001369_060 Hb_001369_060 Hb_098709_010--Hb_001369_060 Hb_002207_100 Hb_002207_100 Hb_098709_010--Hb_002207_100 Hb_033491_010 Hb_033491_010 Hb_098709_010--Hb_033491_010 Hb_000700_090 Hb_000700_090 Hb_098709_010--Hb_000700_090 Hb_026048_090--Hb_009510_030 Hb_127979_010 Hb_127979_010 Hb_026048_090--Hb_127979_010 Hb_026048_090--Hb_000057_060 Hb_026048_090--Hb_001433_170 Hb_004126_010 Hb_004126_010 Hb_026048_090--Hb_004126_010 Hb_009510_030--Hb_004126_010 Hb_002506_010 Hb_002506_010 Hb_009510_030--Hb_002506_010 Hb_009510_030--Hb_000057_060 Hb_003001_030 Hb_003001_030 Hb_009510_030--Hb_003001_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
27.5115 2.47113 1.10895 1.82633 27.8535 33.6698
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
36.5318 17.8564 23.6852 7.71123 0.894118

CAGE analysis