Hb_005285_010

Information

Type -
Description -
Location Contig5285: 23297-25771
Sequence    

Annotation

kegg
ID rcu:RCOM_0659440
description Ent-kaurenoic acid oxidase, putative (EC:1.14.13.79)
nr
ID XP_012083781.1
description PREDICTED: ent-kaurenoic acid oxidase 1-like isoform X1 [Jatropha curcas]
swissprot
ID O23051
description Ent-kaurenoic acid oxidase 1 OS=Arabidopsis thaliana GN=KAO1 PE=2 SV=1
trembl
ID A0A067JY76
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14697 PE=3 SV=1
Gene Ontology
ID GO:0005506
description ent-kaurenoic acid oxidase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005285_010 0.0 - - PREDICTED: ent-kaurenoic acid oxidase 1-like isoform X1 [Jatropha curcas]
2 Hb_162126_010 0.1432511978 - - -
3 Hb_000430_010 0.1453859571 - - -
4 Hb_125847_010 0.1490422458 - - -
5 Hb_008246_050 0.1536550596 - - -
6 Hb_005799_040 0.1536716922 - - PREDICTED: bidirectional sugar transporter SWEET4-like isoform X1 [Gossypium raimondii]
7 Hb_048874_010 0.1560401969 - - hypothetical protein POPTR_0016s10870g [Populus trichocarpa]
8 Hb_169574_010 0.1570601313 - - PREDICTED: uncharacterized protein LOC104120373 [Nicotiana tomentosiformis]
9 Hb_168311_010 0.1735752959 - - -
10 Hb_127993_010 0.1812741874 - - PREDICTED: choline monooxygenase, chloroplastic isoform X4 [Jatropha curcas]
11 Hb_003226_290 0.1844040321 - - catalytic, putative [Ricinus communis]
12 Hb_000139_440 0.1871551731 - - unnamed protein product [Coffea canephora]
13 Hb_000590_020 0.1941756609 - - hypothetical protein JCGZ_18748 [Jatropha curcas]
14 Hb_054362_010 0.1957343108 - - PREDICTED: uncharacterized protein LOC105650428 [Jatropha curcas]
15 Hb_047040_010 0.1972809278 - - integrase [Gossypium herbaceum]
16 Hb_022206_060 0.2029600701 - - -
17 Hb_090826_010 0.2060189673 - - PREDICTED: uncharacterized protein LOC105786910 [Gossypium raimondii]
18 Hb_030928_010 0.2093714121 - - -
19 Hb_181535_010 0.2098691602 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
20 Hb_000351_030 0.211570724 - - putative NBS-LRR type disease resistance protein [Prunus persica]

Gene co-expression network

sample Hb_005285_010 Hb_005285_010 Hb_162126_010 Hb_162126_010 Hb_005285_010--Hb_162126_010 Hb_000430_010 Hb_000430_010 Hb_005285_010--Hb_000430_010 Hb_125847_010 Hb_125847_010 Hb_005285_010--Hb_125847_010 Hb_008246_050 Hb_008246_050 Hb_005285_010--Hb_008246_050 Hb_005799_040 Hb_005799_040 Hb_005285_010--Hb_005799_040 Hb_048874_010 Hb_048874_010 Hb_005285_010--Hb_048874_010 Hb_162126_010--Hb_000430_010 Hb_162126_010--Hb_125847_010 Hb_162126_010--Hb_008246_050 Hb_162126_010--Hb_005799_040 Hb_162126_010--Hb_048874_010 Hb_169574_010 Hb_169574_010 Hb_162126_010--Hb_169574_010 Hb_000430_010--Hb_125847_010 Hb_168311_010 Hb_168311_010 Hb_000430_010--Hb_168311_010 Hb_000430_010--Hb_008246_050 Hb_000430_010--Hb_005799_040 Hb_000430_010--Hb_048874_010 Hb_125847_010--Hb_168311_010 Hb_000139_440 Hb_000139_440 Hb_125847_010--Hb_000139_440 Hb_000590_020 Hb_000590_020 Hb_125847_010--Hb_000590_020 Hb_047040_010 Hb_047040_010 Hb_125847_010--Hb_047040_010 Hb_008246_050--Hb_005799_040 Hb_008246_050--Hb_048874_010 Hb_008246_050--Hb_169574_010 Hb_127993_010 Hb_127993_010 Hb_008246_050--Hb_127993_010 Hb_054362_010 Hb_054362_010 Hb_008246_050--Hb_054362_010 Hb_005799_040--Hb_048874_010 Hb_005799_040--Hb_169574_010 Hb_005799_040--Hb_127993_010 Hb_005799_040--Hb_054362_010 Hb_048874_010--Hb_169574_010 Hb_048874_010--Hb_127993_010 Hb_048874_010--Hb_054362_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0116816 0.0464239 0.00915233 0 0 0.0343441
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0797343 0.1882 6.47533 3.35784 0.0439854

CAGE analysis