Hb_005288_030

Information

Type -
Description -
Location Contig5288: 10073-11197
Sequence    

Annotation

kegg
ID rcu:RCOM_0609800
description hypothetical protein
nr
ID XP_012089367.1
description PREDICTED: uncharacterized protein LOC105647760 [Jatropha curcas]
swissprot
ID Q58FX0
description BON1-associated protein 2 OS=Arabidopsis thaliana GN=BAP2 PE=1 SV=1
trembl
ID A0A067JUT5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23563 PE=4 SV=1
Gene Ontology
ID GO:0005515
description haze protective factor 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005288_030 0.0 - - PREDICTED: uncharacterized protein LOC105647760 [Jatropha curcas]
2 Hb_004156_010 0.1588635801 - - hypothetical protein JCGZ_08917 [Jatropha curcas]
3 Hb_000165_190 0.173251095 - - PREDICTED: U-box domain-containing protein 12-like [Jatropha curcas]
4 Hb_002660_100 0.1929095963 - - plasma membrane intrinsic protein [Hevea brasiliensis]
5 Hb_051100_010 0.2063794756 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
6 Hb_001481_020 0.2158543965 - - PREDICTED: L-type lectin-domain containing receptor kinase V.9-like [Jatropha curcas]
7 Hb_000608_020 0.2252147866 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
8 Hb_001558_070 0.2322755224 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
9 Hb_003556_060 0.2331725499 - - -
10 Hb_000077_460 0.2355451826 - - -
11 Hb_006478_170 0.236704822 - - hypothetical protein POPTR_0005s23360g [Populus trichocarpa]
12 Hb_000215_340 0.2369718325 - - gamma glutamyl transpeptidases, putative [Ricinus communis]
13 Hb_001021_140 0.2398175062 transcription factor TF Family: C2H2 PREDICTED: protein indeterminate-domain 2-like [Jatropha curcas]
14 Hb_000935_070 0.2410566142 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
15 Hb_002762_070 0.2416433252 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]
16 Hb_001283_010 0.2425264834 transcription factor TF Family: LOB LOB domain-containing protein 15 [Populus tremula x Populus tremuloides]
17 Hb_000045_180 0.2433430053 - - aquaporin PIP1 [Hevea brasiliensis]
18 Hb_004341_010 0.2447962818 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
19 Hb_028207_030 0.2450289431 - - PREDICTED: non-specific lipid-transfer protein 8-like [Citrus sinensis]
20 Hb_000365_290 0.2469805373 - - PREDICTED: protein MTL1-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_005288_030 Hb_005288_030 Hb_004156_010 Hb_004156_010 Hb_005288_030--Hb_004156_010 Hb_000165_190 Hb_000165_190 Hb_005288_030--Hb_000165_190 Hb_002660_100 Hb_002660_100 Hb_005288_030--Hb_002660_100 Hb_051100_010 Hb_051100_010 Hb_005288_030--Hb_051100_010 Hb_001481_020 Hb_001481_020 Hb_005288_030--Hb_001481_020 Hb_000608_020 Hb_000608_020 Hb_005288_030--Hb_000608_020 Hb_027445_080 Hb_027445_080 Hb_004156_010--Hb_027445_080 Hb_031862_090 Hb_031862_090 Hb_004156_010--Hb_031862_090 Hb_005203_010 Hb_005203_010 Hb_004156_010--Hb_005203_010 Hb_002762_070 Hb_002762_070 Hb_004156_010--Hb_002762_070 Hb_017661_020 Hb_017661_020 Hb_004156_010--Hb_017661_020 Hb_002282_030 Hb_002282_030 Hb_004156_010--Hb_002282_030 Hb_000165_190--Hb_004156_010 Hb_001021_140 Hb_001021_140 Hb_000165_190--Hb_001021_140 Hb_001227_020 Hb_001227_020 Hb_000165_190--Hb_001227_020 Hb_001558_070 Hb_001558_070 Hb_000165_190--Hb_001558_070 Hb_000077_470 Hb_000077_470 Hb_000165_190--Hb_000077_470 Hb_002660_100--Hb_000608_020 Hb_004195_170 Hb_004195_170 Hb_002660_100--Hb_004195_170 Hb_002660_100--Hb_051100_010 Hb_165130_010 Hb_165130_010 Hb_002660_100--Hb_165130_010 Hb_001148_040 Hb_001148_040 Hb_002660_100--Hb_001148_040 Hb_000429_110 Hb_000429_110 Hb_002660_100--Hb_000429_110 Hb_135811_060 Hb_135811_060 Hb_051100_010--Hb_135811_060 Hb_000521_210 Hb_000521_210 Hb_051100_010--Hb_000521_210 Hb_005380_030 Hb_005380_030 Hb_051100_010--Hb_005380_030 Hb_015473_010 Hb_015473_010 Hb_051100_010--Hb_015473_010 Hb_000856_240 Hb_000856_240 Hb_051100_010--Hb_000856_240 Hb_000172_010 Hb_000172_010 Hb_051100_010--Hb_000172_010 Hb_003442_010 Hb_003442_010 Hb_001481_020--Hb_003442_010 Hb_001481_020--Hb_000608_020 Hb_000189_490 Hb_000189_490 Hb_001481_020--Hb_000189_490 Hb_000365_290 Hb_000365_290 Hb_001481_020--Hb_000365_290 Hb_001481_020--Hb_004156_010 Hb_068332_010 Hb_068332_010 Hb_001481_020--Hb_068332_010 Hb_001377_500 Hb_001377_500 Hb_000608_020--Hb_001377_500 Hb_000608_020--Hb_000429_110 Hb_000608_020--Hb_001558_070 Hb_001259_100 Hb_001259_100 Hb_000608_020--Hb_001259_100 Hb_002928_180 Hb_002928_180 Hb_000608_020--Hb_002928_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.264912 0.0143335 0.119362 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0639414 0.221346 0

CAGE analysis