Hb_005305_120

Information

Type -
Description -
Location Contig5305: 68570-73323
Sequence    

Annotation

kegg
ID rcu:RCOM_1577820
description calcium-dependent protein kinase, putative (EC:2.7.11.17)
nr
ID XP_012090018.1
description PREDICTED: calcium-dependent protein kinase 8-like [Jatropha curcas]
swissprot
ID Q42438
description Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana GN=CPK8 PE=1 SV=1
trembl
ID A0A067JE09
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25932 PE=4 SV=1
Gene Ontology
ID GO:0004683
description calcium-dependent protein kinase 8

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_47344: 70674-73224
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005305_120 0.0 - - PREDICTED: calcium-dependent protein kinase 8-like [Jatropha curcas]
2 Hb_002835_280 0.1143667347 - - PREDICTED: L-type lectin-domain containing receptor kinase S.1 [Jatropha curcas]
3 Hb_000861_100 0.1200681426 - - PREDICTED: probable fucosyltransferase 8 isoform X1 [Jatropha curcas]
4 Hb_001124_140 0.1206378549 - - PREDICTED: inactive beta-amylase 9 [Jatropha curcas]
5 Hb_002759_100 0.1237884687 - - hypothetical protein JCGZ_21777 [Jatropha curcas]
6 Hb_009449_100 0.1245774224 - - PREDICTED: equilibrative nucleotide transporter 1 [Jatropha curcas]
7 Hb_005731_100 0.1331276125 - - monovalent cation:proton antiporter, putative [Ricinus communis]
8 Hb_000057_130 0.1333591515 - - PREDICTED: pyridoxal 5'-phosphate synthase-like subunit PDX1.2 [Jatropha curcas]
9 Hb_001148_060 0.136346172 - - hypothetical protein JCGZ_00278 [Jatropha curcas]
10 Hb_001153_100 0.1386911306 transcription factor TF Family: HB PREDICTED: homeobox protein HD1 [Jatropha curcas]
11 Hb_009862_020 0.1389667934 - - PREDICTED: uncharacterized protein LOC105650670 [Jatropha curcas]
12 Hb_004052_110 0.1412809412 - - PREDICTED: host cell factor 2 isoform X1 [Jatropha curcas]
13 Hb_000032_510 0.143352734 - - PREDICTED: SUN domain-containing protein 2 [Jatropha curcas]
14 Hb_001250_080 0.1494657733 - - PREDICTED: F-box/kelch-repeat protein At1g23390 [Jatropha curcas]
15 Hb_003216_130 0.1497219675 - - PREDICTED: uncharacterized protein LOC105641500 [Jatropha curcas]
16 Hb_001969_130 0.1497266102 - - PREDICTED: molybdate transporter 2 [Jatropha curcas]
17 Hb_054865_050 0.1499976932 - - calcium-dependent protein kinase, putative [Ricinus communis]
18 Hb_002349_030 0.1529142378 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002259_220 0.1531670004 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 66 [Jatropha curcas]
20 Hb_000487_370 0.1536618581 - - -

Gene co-expression network

sample Hb_005305_120 Hb_005305_120 Hb_002835_280 Hb_002835_280 Hb_005305_120--Hb_002835_280 Hb_000861_100 Hb_000861_100 Hb_005305_120--Hb_000861_100 Hb_001124_140 Hb_001124_140 Hb_005305_120--Hb_001124_140 Hb_002759_100 Hb_002759_100 Hb_005305_120--Hb_002759_100 Hb_009449_100 Hb_009449_100 Hb_005305_120--Hb_009449_100 Hb_005731_100 Hb_005731_100 Hb_005305_120--Hb_005731_100 Hb_001153_100 Hb_001153_100 Hb_002835_280--Hb_001153_100 Hb_001969_130 Hb_001969_130 Hb_002835_280--Hb_001969_130 Hb_000032_510 Hb_000032_510 Hb_002835_280--Hb_000032_510 Hb_000923_100 Hb_000923_100 Hb_002835_280--Hb_000923_100 Hb_002835_280--Hb_001124_140 Hb_000057_130 Hb_000057_130 Hb_000861_100--Hb_000057_130 Hb_007229_050 Hb_007229_050 Hb_000861_100--Hb_007229_050 Hb_003371_070 Hb_003371_070 Hb_000861_100--Hb_003371_070 Hb_007537_030 Hb_007537_030 Hb_000861_100--Hb_007537_030 Hb_004129_010 Hb_004129_010 Hb_000861_100--Hb_004129_010 Hb_001124_140--Hb_005731_100 Hb_001124_140--Hb_001969_130 Hb_022425_050 Hb_022425_050 Hb_001124_140--Hb_022425_050 Hb_002026_030 Hb_002026_030 Hb_001124_140--Hb_002026_030 Hb_001865_010 Hb_001865_010 Hb_001124_140--Hb_001865_010 Hb_001124_140--Hb_004129_010 Hb_001148_060 Hb_001148_060 Hb_002759_100--Hb_001148_060 Hb_003687_010 Hb_003687_010 Hb_002759_100--Hb_003687_010 Hb_000270_830 Hb_000270_830 Hb_002759_100--Hb_000270_830 Hb_003581_130 Hb_003581_130 Hb_002759_100--Hb_003581_130 Hb_011310_150 Hb_011310_150 Hb_002759_100--Hb_011310_150 Hb_054865_050 Hb_054865_050 Hb_009449_100--Hb_054865_050 Hb_001514_240 Hb_001514_240 Hb_009449_100--Hb_001514_240 Hb_005064_070 Hb_005064_070 Hb_009449_100--Hb_005064_070 Hb_002259_220 Hb_002259_220 Hb_009449_100--Hb_002259_220 Hb_026698_020 Hb_026698_020 Hb_009449_100--Hb_026698_020 Hb_000329_790 Hb_000329_790 Hb_009449_100--Hb_000329_790 Hb_005731_100--Hb_022425_050 Hb_000046_480 Hb_000046_480 Hb_005731_100--Hb_000046_480 Hb_005731_100--Hb_001153_100 Hb_000334_050 Hb_000334_050 Hb_005731_100--Hb_000334_050 Hb_001754_120 Hb_001754_120 Hb_005731_100--Hb_001754_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.56914 8.0721 9.38228 10.1782 0.208596 0.342401
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.97841 1.92204 1.21643 4.86764 11.0605

CAGE analysis