Hb_005305_130

Information

Type -
Description -
Location Contig5305: 74112-78554
Sequence    

Annotation

kegg
ID rcu:RCOM_1577810
description Sulfite reductase [ferredoxin], putative (EC:1.8.7.1)
nr
ID XP_012090019.1
description PREDICTED: sulfite reductase [ferredoxin], chloroplastic [Jatropha curcas]
swissprot
ID O82802
description Sulfite reductase 1 [ferredoxin], chloroplastic OS=Nicotiana tabacum GN=SIR1 PE=1 SV=1
trembl
ID A0A067JE50
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25933 PE=4 SV=1
Gene Ontology
ID GO:0009941
description sulfite reductase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_47344: 70674-73224 , PASA_asmbl_47345: 74117-78446
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005305_130 0.0 - - PREDICTED: sulfite reductase [ferredoxin], chloroplastic [Jatropha curcas]
2 Hb_009158_060 0.0469973192 - - PREDICTED: CDPK-related kinase 3 [Jatropha curcas]
3 Hb_003661_010 0.0606624117 - - PREDICTED: zinc transporter 6, chloroplastic [Jatropha curcas]
4 Hb_160608_010 0.06150505 - - PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1 [Populus euphratica]
5 Hb_001414_010 0.0659955748 transcription factor TF Family: ARR-B two-component sensor histidine kinase bacteria, putative [Ricinus communis]
6 Hb_029552_020 0.0726048806 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001159_060 0.074578461 - - PREDICTED: SNARE-interacting protein KEULE [Jatropha curcas]
8 Hb_000172_360 0.0765719983 - - PREDICTED: apoptotic chromatin condensation inducer in the nucleus [Jatropha curcas]
9 Hb_000358_220 0.0768856748 - - PREDICTED: SNW/SKI-interacting protein-like [Jatropha curcas]
10 Hb_000300_030 0.0775621427 - - HIV-1 rev binding protein, hrbl, putative [Ricinus communis]
11 Hb_002600_070 0.0780624567 transcription factor TF Family: TAZ PREDICTED: histone acetyltransferase HAC12 [Jatropha curcas]
12 Hb_002809_160 0.0782581172 - - PREDICTED: protein FAM63A [Jatropha curcas]
13 Hb_000862_100 0.0787436357 - - PREDICTED: plastid division protein CDP1, chloroplastic [Jatropha curcas]
14 Hb_000562_070 0.0797755487 - - PREDICTED: uncharacterized protein LOC105635371 isoform X1 [Jatropha curcas]
15 Hb_048476_080 0.080548296 transcription factor TF Family: ARR-B two-component sensor histidine kinase bacteria, putative [Ricinus communis]
16 Hb_000317_110 0.0814971114 - - PREDICTED: external alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial isoform X2 [Jatropha curcas]
17 Hb_000748_090 0.0822714408 - - glucose inhibited division protein A, putative [Ricinus communis]
18 Hb_001279_020 0.0828726512 - - PREDICTED: uncharacterized protein LOC105633240 [Jatropha curcas]
19 Hb_001178_030 0.0831544589 - - PREDICTED: 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic [Jatropha curcas]
20 Hb_001277_340 0.0833095593 - - aldo/keto reductase, putative [Ricinus communis]

Gene co-expression network

sample Hb_005305_130 Hb_005305_130 Hb_009158_060 Hb_009158_060 Hb_005305_130--Hb_009158_060 Hb_003661_010 Hb_003661_010 Hb_005305_130--Hb_003661_010 Hb_160608_010 Hb_160608_010 Hb_005305_130--Hb_160608_010 Hb_001414_010 Hb_001414_010 Hb_005305_130--Hb_001414_010 Hb_029552_020 Hb_029552_020 Hb_005305_130--Hb_029552_020 Hb_001159_060 Hb_001159_060 Hb_005305_130--Hb_001159_060 Hb_009158_060--Hb_160608_010 Hb_009158_060--Hb_003661_010 Hb_000172_360 Hb_000172_360 Hb_009158_060--Hb_000172_360 Hb_000030_140 Hb_000030_140 Hb_009158_060--Hb_000030_140 Hb_008054_040 Hb_008054_040 Hb_009158_060--Hb_008054_040 Hb_000844_050 Hb_000844_050 Hb_003661_010--Hb_000844_050 Hb_048476_080 Hb_048476_080 Hb_003661_010--Hb_048476_080 Hb_000300_030 Hb_000300_030 Hb_003661_010--Hb_000300_030 Hb_003661_010--Hb_160608_010 Hb_003680_020 Hb_003680_020 Hb_003661_010--Hb_003680_020 Hb_003661_010--Hb_001414_010 Hb_006478_030 Hb_006478_030 Hb_160608_010--Hb_006478_030 Hb_160608_010--Hb_001414_010 Hb_001507_050 Hb_001507_050 Hb_160608_010--Hb_001507_050 Hb_000318_150 Hb_000318_150 Hb_160608_010--Hb_000318_150 Hb_021977_010 Hb_021977_010 Hb_001414_010--Hb_021977_010 Hb_009476_120 Hb_009476_120 Hb_001414_010--Hb_009476_120 Hb_008165_020 Hb_008165_020 Hb_001414_010--Hb_008165_020 Hb_001414_010--Hb_000300_030 Hb_001140_180 Hb_001140_180 Hb_029552_020--Hb_001140_180 Hb_001279_020 Hb_001279_020 Hb_029552_020--Hb_001279_020 Hb_000529_130 Hb_000529_130 Hb_029552_020--Hb_000529_130 Hb_002809_160 Hb_002809_160 Hb_029552_020--Hb_002809_160 Hb_000562_070 Hb_000562_070 Hb_029552_020--Hb_000562_070 Hb_000406_210 Hb_000406_210 Hb_001159_060--Hb_000406_210 Hb_000815_300 Hb_000815_300 Hb_001159_060--Hb_000815_300 Hb_000862_100 Hb_000862_100 Hb_001159_060--Hb_000862_100 Hb_001159_060--Hb_000172_360 Hb_001159_060--Hb_009158_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.0924 57.4319 71.9072 53.3395 29.198 25.8884
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.7831 12.1897 20.4043 44.7061 78.0275

CAGE analysis