Hb_005305_190

Information

Type transcription factor
Description TF Family: NAC
Location Contig5305: 102575-103787
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0001101
description nac domain-containing protein 72-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005305_190 0.0 transcription factor TF Family: NAC -
2 Hb_008221_120 0.0404200448 - - PREDICTED: GDSL esterase/lipase At5g63170-like [Jatropha curcas]
3 Hb_005779_070 0.1142593383 - - -
4 Hb_005952_020 0.1146242368 - - -
5 Hb_010589_100 0.1291988475 - - Thioredoxin domain-containing protein 9-like protein [Morus notabilis]
6 Hb_000445_240 0.2340793955 - - conserved hypothetical protein [Ricinus communis]
7 Hb_007140_010 0.2427285453 - - -
8 Hb_172179_010 0.2431637267 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
9 Hb_114146_010 0.247387802 - - hypothetical protein JCGZ_15608 [Jatropha curcas]
10 Hb_000976_370 0.2493465326 - - beta-glucosidase, putative [Ricinus communis]
11 Hb_120112_010 0.2500936543 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
12 Hb_008689_020 0.2507483891 - - conserved hypothetical protein [Ricinus communis]
13 Hb_106496_010 0.283166625 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
14 Hb_115326_010 0.3448568227 - - -
15 Hb_001934_020 0.3454484482 - - PREDICTED: uncharacterized protein LOC105178413 [Sesamum indicum]
16 Hb_006535_010 0.3593172356 - - -
17 Hb_000009_540 0.3831932113 - - hypothetical protein JCGZ_12303 [Jatropha curcas]
18 Hb_015836_010 0.3857546686 - - -
19 Hb_017214_050 0.4035551301 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
20 Hb_033594_010 0.4046135636 - - -

Gene co-expression network

sample Hb_005305_190 Hb_005305_190 Hb_008221_120 Hb_008221_120 Hb_005305_190--Hb_008221_120 Hb_005779_070 Hb_005779_070 Hb_005305_190--Hb_005779_070 Hb_005952_020 Hb_005952_020 Hb_005305_190--Hb_005952_020 Hb_010589_100 Hb_010589_100 Hb_005305_190--Hb_010589_100 Hb_000445_240 Hb_000445_240 Hb_005305_190--Hb_000445_240 Hb_007140_010 Hb_007140_010 Hb_005305_190--Hb_007140_010 Hb_008221_120--Hb_005952_020 Hb_008221_120--Hb_005779_070 Hb_008221_120--Hb_010589_100 Hb_000976_370 Hb_000976_370 Hb_008221_120--Hb_000976_370 Hb_120112_010 Hb_120112_010 Hb_008221_120--Hb_120112_010 Hb_005779_070--Hb_005952_020 Hb_005779_070--Hb_010589_100 Hb_005779_070--Hb_007140_010 Hb_172179_010 Hb_172179_010 Hb_005779_070--Hb_172179_010 Hb_005952_020--Hb_010589_100 Hb_005952_020--Hb_007140_010 Hb_005952_020--Hb_172179_010 Hb_010589_100--Hb_007140_010 Hb_010589_100--Hb_172179_010 Hb_114146_010 Hb_114146_010 Hb_000445_240--Hb_114146_010 Hb_006535_010 Hb_006535_010 Hb_000445_240--Hb_006535_010 Hb_000445_240--Hb_008221_120 Hb_000445_240--Hb_005779_070 Hb_000445_240--Hb_005952_020 Hb_007140_010--Hb_172179_010 Hb_007140_010--Hb_114146_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0850023 0 0.0270299 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.122346 0 0 0

CAGE analysis