Hb_005321_010

Information

Type -
Description -
Location Contig5321: 3-485
Sequence    

Annotation

kegg
ID rcu:RCOM_1213740
description hypothetical protein
nr
ID XP_012085321.1
description PREDICTED: uncharacterized protein LOC105644542 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K2P8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17693 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005321_010 0.0 - - PREDICTED: uncharacterized protein LOC105644542 [Jatropha curcas]
2 Hb_004100_090 0.1380429919 - - RecName: Full=Profilin-6; AltName: Full=Pollen allergen Hev b 8.0204; AltName: Allergen=Hev b 8.0204 [Hevea brasiliensis]
3 Hb_000002_260 0.1660629454 - - conserved hypothetical protein [Ricinus communis]
4 Hb_012053_010 0.1838005532 - - srpk, putative [Ricinus communis]
5 Hb_003540_200 0.1948892224 - - PREDICTED: E3 ubiquitin-protein ligase RMA3-like [Jatropha curcas]
6 Hb_002217_460 0.1950804313 - - PREDICTED: transcription factor bHLH147-like [Jatropha curcas]
7 Hb_001164_030 0.2001833253 - - GMP synthase [glutamine-hydrolyzing] subunit A, putative [Ricinus communis]
8 Hb_000291_270 0.2027354348 - - hypothetical protein JCGZ_12006 [Jatropha curcas]
9 Hb_000483_090 0.2041508284 - - -
10 Hb_000589_160 0.2075908203 - - PREDICTED: expansin-A4 [Jatropha curcas]
11 Hb_000656_410 0.2102022392 - - hypothetical protein POPTR_0003s06410g [Populus trichocarpa]
12 Hb_001766_030 0.2130479076 - - hypothetical protein POPTR_0017s12640g [Populus trichocarpa]
13 Hb_001016_080 0.2137150412 - - hypothetical protein EUGRSUZ_J02452 [Eucalyptus grandis]
14 Hb_138455_010 0.2162317161 - - UDP-glucosyltransferase, putative [Ricinus communis]
15 Hb_042871_010 0.2177609456 - - PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Jatropha curcas]
16 Hb_086692_020 0.2182437529 - - PREDICTED: protein kinase APK1B, chloroplastic-like [Jatropha curcas]
17 Hb_001266_030 0.2187854451 - - PREDICTED: lipid phosphate phosphatase epsilon 2, chloroplastic-like [Jatropha curcas]
18 Hb_002784_150 0.2193692863 - - hypothetical protein POPTR_0001s06620g [Populus trichocarpa]
19 Hb_004162_180 0.2209201347 - - zinc finger protein, putative [Ricinus communis]
20 Hb_028271_020 0.2309905312 - - acyl-CoA oxidase, putative [Ricinus communis]

Gene co-expression network

sample Hb_005321_010 Hb_005321_010 Hb_004100_090 Hb_004100_090 Hb_005321_010--Hb_004100_090 Hb_000002_260 Hb_000002_260 Hb_005321_010--Hb_000002_260 Hb_012053_010 Hb_012053_010 Hb_005321_010--Hb_012053_010 Hb_003540_200 Hb_003540_200 Hb_005321_010--Hb_003540_200 Hb_002217_460 Hb_002217_460 Hb_005321_010--Hb_002217_460 Hb_001164_030 Hb_001164_030 Hb_005321_010--Hb_001164_030 Hb_000483_090 Hb_000483_090 Hb_004100_090--Hb_000483_090 Hb_004100_090--Hb_012053_010 Hb_004100_090--Hb_003540_200 Hb_000589_160 Hb_000589_160 Hb_004100_090--Hb_000589_160 Hb_027892_040 Hb_027892_040 Hb_004100_090--Hb_027892_040 Hb_000002_260--Hb_002217_460 Hb_001766_030 Hb_001766_030 Hb_000002_260--Hb_001766_030 Hb_001016_080 Hb_001016_080 Hb_000002_260--Hb_001016_080 Hb_004108_110 Hb_004108_110 Hb_000002_260--Hb_004108_110 Hb_001225_010 Hb_001225_010 Hb_000002_260--Hb_001225_010 Hb_002105_030 Hb_002105_030 Hb_012053_010--Hb_002105_030 Hb_002344_070 Hb_002344_070 Hb_012053_010--Hb_002344_070 Hb_000878_020 Hb_000878_020 Hb_012053_010--Hb_000878_020 Hb_012053_010--Hb_003540_200 Hb_001266_030 Hb_001266_030 Hb_012053_010--Hb_001266_030 Hb_000110_170 Hb_000110_170 Hb_012053_010--Hb_000110_170 Hb_003540_200--Hb_000110_170 Hb_003020_330 Hb_003020_330 Hb_003540_200--Hb_003020_330 Hb_003540_200--Hb_001225_010 Hb_000291_270 Hb_000291_270 Hb_003540_200--Hb_000291_270 Hb_154141_030 Hb_154141_030 Hb_003540_200--Hb_154141_030 Hb_000099_070 Hb_000099_070 Hb_002217_460--Hb_000099_070 Hb_091889_010 Hb_091889_010 Hb_002217_460--Hb_091889_010 Hb_002217_460--Hb_001016_080 Hb_001449_100 Hb_001449_100 Hb_002217_460--Hb_001449_100 Hb_020805_060 Hb_020805_060 Hb_001164_030--Hb_020805_060 Hb_000768_140 Hb_000768_140 Hb_001164_030--Hb_000768_140 Hb_001164_030--Hb_000483_090 Hb_001164_030--Hb_000291_270 Hb_001164_030--Hb_091889_010 Hb_000120_150 Hb_000120_150 Hb_001164_030--Hb_000120_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.76564 10.7173 5.82393 44.8428 2.49815 4.09392
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.6409 223.774 45.82 7.03333 8.90515

CAGE analysis