Hb_005333_030

Information

Type -
Description -
Location Contig5333: 17342-19828
Sequence    

Annotation

kegg
ID rcu:RCOM_1039090
description 14-3-3 protein, putative
nr
ID KDP41459.1
description hypothetical protein JCGZ_15866 [Jatropha curcas]
swissprot
ID P48348
description 14-3-3-like protein GF14 kappa OS=Arabidopsis thaliana GN=GRF8 PE=1 SV=2
trembl
ID A0A067LBG5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15866 PE=3 SV=1
Gene Ontology
ID GO:0019904
description 14-3-3-like protein b

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_47458: 17370-19829
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005333_030 0.0 - - hypothetical protein JCGZ_15866 [Jatropha curcas]
2 Hb_002666_080 0.1030091283 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_003710_040 0.1061422051 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
4 Hb_167381_020 0.1086015902 - - PREDICTED: uncharacterized protein LOC105650634 [Jatropha curcas]
5 Hb_004017_040 0.1097700074 - - kinetochore protein nuf2, putative [Ricinus communis]
6 Hb_118840_050 0.1102182929 - - hypothetical protein CISIN_1g0019781mg, partial [Citrus sinensis]
7 Hb_000261_290 0.110478982 - - eukaryotic translation elongation factor 1-alpha [Hevea brasiliensis]
8 Hb_000120_420 0.1144887755 - - PREDICTED: AT-rich interactive domain-containing protein 5-like [Jatropha curcas]
9 Hb_001492_010 0.1150241697 - - PREDICTED: diacylglycerol kinase 3-like isoform X2 [Populus euphratica]
10 Hb_000336_110 0.1155653552 - - Uracil phosphoribosyltransferase, putative [Ricinus communis]
11 Hb_002081_120 0.1157520504 - - PREDICTED: magnesium transporter MRS2-3 [Jatropha curcas]
12 Hb_000175_350 0.1172209905 - - phopholipase d alpha, putative [Ricinus communis]
13 Hb_001221_160 0.1175840165 - - PREDICTED: exocyst complex component EXO70B1 [Jatropha curcas]
14 Hb_002742_080 0.117654228 - - unknown [Populus trichocarpa]
15 Hb_000120_620 0.1185647854 - - PREDICTED: serine/threonine-protein kinase/endoribonuclease IRE1a isoform X1 [Jatropha curcas]
16 Hb_000158_130 0.1194171046 - - PREDICTED: uncharacterized protein LOC105647950 isoform X1 [Jatropha curcas]
17 Hb_000098_130 0.119946218 - - PREDICTED: serine/threonine-protein kinase SRK2A [Jatropha curcas]
18 Hb_000034_160 0.1205383987 - - hypothetical protein EUGRSUZ_F02151 [Eucalyptus grandis]
19 Hb_004899_070 0.1210929239 - - PREDICTED: RRP12-like protein [Jatropha curcas]
20 Hb_001662_030 0.1223539395 - - PREDICTED: F-box protein SKIP23-like [Populus euphratica]

Gene co-expression network

sample Hb_005333_030 Hb_005333_030 Hb_002666_080 Hb_002666_080 Hb_005333_030--Hb_002666_080 Hb_003710_040 Hb_003710_040 Hb_005333_030--Hb_003710_040 Hb_167381_020 Hb_167381_020 Hb_005333_030--Hb_167381_020 Hb_004017_040 Hb_004017_040 Hb_005333_030--Hb_004017_040 Hb_118840_050 Hb_118840_050 Hb_005333_030--Hb_118840_050 Hb_000261_290 Hb_000261_290 Hb_005333_030--Hb_000261_290 Hb_002081_120 Hb_002081_120 Hb_002666_080--Hb_002081_120 Hb_002890_100 Hb_002890_100 Hb_002666_080--Hb_002890_100 Hb_000264_080 Hb_000264_080 Hb_002666_080--Hb_000264_080 Hb_056987_010 Hb_056987_010 Hb_002666_080--Hb_056987_010 Hb_002666_080--Hb_118840_050 Hb_000336_110 Hb_000336_110 Hb_002666_080--Hb_000336_110 Hb_001221_160 Hb_001221_160 Hb_003710_040--Hb_001221_160 Hb_004899_070 Hb_004899_070 Hb_003710_040--Hb_004899_070 Hb_009028_030 Hb_009028_030 Hb_003710_040--Hb_009028_030 Hb_000640_200 Hb_000640_200 Hb_003710_040--Hb_000640_200 Hb_057451_010 Hb_057451_010 Hb_003710_040--Hb_057451_010 Hb_003710_040--Hb_000261_290 Hb_001307_010 Hb_001307_010 Hb_167381_020--Hb_001307_010 Hb_000116_510 Hb_000116_510 Hb_167381_020--Hb_000116_510 Hb_000120_420 Hb_000120_420 Hb_167381_020--Hb_000120_420 Hb_167381_020--Hb_118840_050 Hb_167381_020--Hb_000336_110 Hb_011909_060 Hb_011909_060 Hb_167381_020--Hb_011909_060 Hb_004017_040--Hb_000261_290 Hb_000331_160 Hb_000331_160 Hb_004017_040--Hb_000331_160 Hb_000098_130 Hb_000098_130 Hb_004017_040--Hb_000098_130 Hb_000953_030 Hb_000953_030 Hb_004017_040--Hb_000953_030 Hb_000186_260 Hb_000186_260 Hb_004017_040--Hb_000186_260 Hb_001946_300 Hb_001946_300 Hb_004017_040--Hb_001946_300 Hb_000917_160 Hb_000917_160 Hb_118840_050--Hb_000917_160 Hb_000191_130 Hb_000191_130 Hb_118840_050--Hb_000191_130 Hb_000062_470 Hb_000062_470 Hb_118840_050--Hb_000062_470 Hb_000577_030 Hb_000577_030 Hb_118840_050--Hb_000577_030 Hb_000230_430 Hb_000230_430 Hb_118840_050--Hb_000230_430 Hb_001047_200 Hb_001047_200 Hb_118840_050--Hb_001047_200 Hb_000261_290--Hb_000098_130 Hb_000261_290--Hb_004899_070 Hb_000120_620 Hb_000120_620 Hb_000261_290--Hb_000120_620 Hb_000313_340 Hb_000313_340 Hb_000261_290--Hb_000313_340 Hb_003097_180 Hb_003097_180 Hb_000261_290--Hb_003097_180 Hb_006588_050 Hb_006588_050 Hb_000261_290--Hb_006588_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
189.268 235.157 95.9926 121.853 187.132 164.956
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
63.0202 28.7319 27.2311 93.3094 40.2397

CAGE analysis