Hb_005333_120

Information

Type -
Description -
Location Contig5333: 100527-101856
Sequence    

Annotation

kegg
ID rcu:RCOM_1039190
description Aspartic proteinase nepenthesin-1 precursor, putative
nr
ID XP_012067981.1
description PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Jatropha curcas]
swissprot
ID Q9LS40
description Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1
trembl
ID A0A067KZ60
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15874 PE=4 SV=1
Gene Ontology
ID GO:0009505
description aspartic proteinase nepenthesin-1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005333_120 0.0 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Jatropha curcas]
2 Hb_004462_040 0.0808482501 - - unnamed protein product [Vitis vinifera]
3 Hb_003435_070 0.083354325 - - PREDICTED: probable pectate lyase 12 isoform X3 [Jatropha curcas]
4 Hb_001053_110 0.1047102022 - - PREDICTED: uncharacterized protein LOC105628699 [Jatropha curcas]
5 Hb_000417_350 0.1065258667 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002333_010 0.1071435017 - - hypothetical protein JCGZ_18834 [Jatropha curcas]
7 Hb_001856_150 0.1089486082 - - -
8 Hb_001564_090 0.1134969429 - - conserved hypothetical protein [Ricinus communis]
9 Hb_118707_020 0.1137153241 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000230_160 0.1157160739 - - PREDICTED: uncharacterized protein LOC105631858 isoform X1 [Jatropha curcas]
11 Hb_006314_020 0.1191153564 - - PREDICTED: GABA transporter 1-like [Jatropha curcas]
12 Hb_029866_080 0.1217104436 - - PREDICTED: probable inactive receptor kinase At4g23740 [Jatropha curcas]
13 Hb_012787_050 0.1219853068 - - PREDICTED: glutathione S-transferase U18-like [Jatropha curcas]
14 Hb_000967_010 0.1220659068 - - hypothetical protein JCGZ_08336 [Jatropha curcas]
15 Hb_009711_040 0.1252039148 - - PREDICTED: uncharacterized protein LOC105647789 [Jatropha curcas]
16 Hb_028008_030 0.1271108207 - - probable xyloglucan endotransglucosylase/hydrolase protein 23 precursor [Malus domestica]
17 Hb_005489_120 0.127357624 - - leucine rich repeat receptor kinase, putative [Ricinus communis]
18 Hb_003371_040 0.1283750553 - - PREDICTED: uncharacterized protein LOC105650327 [Jatropha curcas]
19 Hb_150084_010 0.1284607559 - - PREDICTED: premnaspirodiene oxygenase-like [Vitis vinifera]
20 Hb_003967_010 0.1288397661 - - cytochrome P450, putative [Ricinus communis]

Gene co-expression network

sample Hb_005333_120 Hb_005333_120 Hb_004462_040 Hb_004462_040 Hb_005333_120--Hb_004462_040 Hb_003435_070 Hb_003435_070 Hb_005333_120--Hb_003435_070 Hb_001053_110 Hb_001053_110 Hb_005333_120--Hb_001053_110 Hb_000417_350 Hb_000417_350 Hb_005333_120--Hb_000417_350 Hb_002333_010 Hb_002333_010 Hb_005333_120--Hb_002333_010 Hb_001856_150 Hb_001856_150 Hb_005333_120--Hb_001856_150 Hb_004462_040--Hb_003435_070 Hb_135811_040 Hb_135811_040 Hb_004462_040--Hb_135811_040 Hb_004462_040--Hb_001053_110 Hb_118707_020 Hb_118707_020 Hb_004462_040--Hb_118707_020 Hb_001564_090 Hb_001564_090 Hb_004462_040--Hb_001564_090 Hb_000967_010 Hb_000967_010 Hb_003435_070--Hb_000967_010 Hb_003435_070--Hb_001856_150 Hb_003435_070--Hb_118707_020 Hb_003058_180 Hb_003058_180 Hb_003435_070--Hb_003058_180 Hb_008727_030 Hb_008727_030 Hb_003435_070--Hb_008727_030 Hb_129637_010 Hb_129637_010 Hb_001053_110--Hb_129637_010 Hb_000300_170 Hb_000300_170 Hb_001053_110--Hb_000300_170 Hb_005489_120 Hb_005489_120 Hb_001053_110--Hb_005489_120 Hb_001053_110--Hb_000417_350 Hb_001369_620 Hb_001369_620 Hb_001053_110--Hb_001369_620 Hb_009711_040 Hb_009711_040 Hb_000417_350--Hb_009711_040 Hb_000417_350--Hb_129637_010 Hb_000306_050 Hb_000306_050 Hb_000417_350--Hb_000306_050 Hb_003171_070 Hb_003171_070 Hb_000417_350--Hb_003171_070 Hb_150084_010 Hb_150084_010 Hb_002333_010--Hb_150084_010 Hb_000963_010 Hb_000963_010 Hb_002333_010--Hb_000963_010 Hb_012787_050 Hb_012787_050 Hb_002333_010--Hb_012787_050 Hb_001568_010 Hb_001568_010 Hb_002333_010--Hb_001568_010 Hb_000318_060 Hb_000318_060 Hb_002333_010--Hb_000318_060 Hb_006314_020 Hb_006314_020 Hb_001856_150--Hb_006314_020 Hb_000230_160 Hb_000230_160 Hb_001856_150--Hb_000230_160 Hb_000081_030 Hb_000081_030 Hb_001856_150--Hb_000081_030 Hb_001856_150--Hb_003171_070 Hb_004875_040 Hb_004875_040 Hb_001856_150--Hb_004875_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0955772 3.98887 2.02311 16.0276 0.173056 0.0895228
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 17.78 2.15278

CAGE analysis