Hb_005357_270

Information

Type -
Description -
Location Contig5357: 216902-222586
Sequence    

Annotation

kegg
ID rcu:RCOM_0905370
description Glucose-6-phosphate/phosphate translocator 2, chloroplast precursor, putative
nr
ID XP_002518517.1
description Glucose-6-phosphate/phosphate translocator 2, chloroplast precursor, putative [Ricinus communis]
swissprot
ID Q94B38
description Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=2
trembl
ID B9RXP8
description Glucose-6-phosphate/phosphate translocator 2, chloroplast, putative OS=Ricinus communis GN=RCOM_0905370 PE=4 SV=1
Gene Ontology
ID GO:0016021
description glucose-6-phosphate phosphate translocator chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_47569: 216896-220474
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005357_270 0.0 - - Glucose-6-phosphate/phosphate translocator 2, chloroplast precursor, putative [Ricinus communis]
2 Hb_012545_080 0.0839646487 - - PREDICTED: uncharacterized protein LOC105633680 [Jatropha curcas]
3 Hb_000996_200 0.0901329706 - - PREDICTED: (+)-neomenthol dehydrogenase-like [Populus euphratica]
4 Hb_000110_330 0.1075062291 - - PREDICTED: probable nitrite transporter At1g68570-like [Glycine max]
5 Hb_006634_080 0.1103421588 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-3b [Jatropha curcas]
6 Hb_009083_010 0.1139814509 - - Phytosulfokines 3 precursor family protein [Populus trichocarpa]
7 Hb_174380_010 0.1241773752 - - kinase, putative [Ricinus communis]
8 Hb_008667_030 0.127449468 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
9 Hb_117127_010 0.1294112804 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH106 [Jatropha curcas]
10 Hb_002471_190 0.1301041667 - - PREDICTED: U-box domain-containing protein 21-like [Jatropha curcas]
11 Hb_012404_050 0.1316050347 - - PREDICTED: uncharacterized protein LOC101496717 [Cicer arietinum]
12 Hb_133845_010 0.1348449786 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
13 Hb_000133_060 0.135576334 - - PREDICTED: protein YLS9-like [Jatropha curcas]
14 Hb_157980_010 0.1395982118 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
15 Hb_006698_020 0.1400062972 - - hypothetical protein JCGZ_04585 [Jatropha curcas]
16 Hb_009683_010 0.1423660712 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
17 Hb_041145_010 0.142423213 - - hypothetical protein CISIN_1g021653mg [Citrus sinensis]
18 Hb_000098_250 0.1443519059 - - UDP-glucose flavonoid 3-O-glucosyltransferase [Medicago truncatula]
19 Hb_004459_110 0.1475937338 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X2 [Populus euphratica]
20 Hb_000003_420 0.1482817422 - - o-methyltransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_005357_270 Hb_005357_270 Hb_012545_080 Hb_012545_080 Hb_005357_270--Hb_012545_080 Hb_000996_200 Hb_000996_200 Hb_005357_270--Hb_000996_200 Hb_000110_330 Hb_000110_330 Hb_005357_270--Hb_000110_330 Hb_006634_080 Hb_006634_080 Hb_005357_270--Hb_006634_080 Hb_009083_010 Hb_009083_010 Hb_005357_270--Hb_009083_010 Hb_174380_010 Hb_174380_010 Hb_005357_270--Hb_174380_010 Hb_012545_080--Hb_000996_200 Hb_012545_080--Hb_000110_330 Hb_009683_010 Hb_009683_010 Hb_012545_080--Hb_009683_010 Hb_007407_010 Hb_007407_010 Hb_012545_080--Hb_007407_010 Hb_012404_050 Hb_012404_050 Hb_012545_080--Hb_012404_050 Hb_000996_200--Hb_006634_080 Hb_157980_010 Hb_157980_010 Hb_000996_200--Hb_157980_010 Hb_004459_110 Hb_004459_110 Hb_000996_200--Hb_004459_110 Hb_004785_120 Hb_004785_120 Hb_000996_200--Hb_004785_120 Hb_000110_330--Hb_012404_050 Hb_041145_010 Hb_041145_010 Hb_000110_330--Hb_041145_010 Hb_000110_330--Hb_007407_010 Hb_000133_060 Hb_000133_060 Hb_000110_330--Hb_000133_060 Hb_006634_080--Hb_157980_010 Hb_006634_080--Hb_009083_010 Hb_006634_080--Hb_174380_010 Hb_006634_080--Hb_000110_330 Hb_022206_030 Hb_022206_030 Hb_009083_010--Hb_022206_030 Hb_009083_010--Hb_174380_010 Hb_009083_010--Hb_000133_060 Hb_000252_080 Hb_000252_080 Hb_009083_010--Hb_000252_080 Hb_117127_010 Hb_117127_010 Hb_174380_010--Hb_117127_010 Hb_000338_030 Hb_000338_030 Hb_174380_010--Hb_000338_030 Hb_174380_010--Hb_000133_060 Hb_174380_010--Hb_012545_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 12.5688 4.90577 2.58355 0.0333692 0.00972499
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.151549 0.0596192 0 2.80964 0.418666

CAGE analysis