Hb_005380_040

Information

Type -
Description -
Location Contig5380: 33819-36479
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa015877mg
description hypothetical protein
nr
ID XP_007221899.1
description hypothetical protein PRUPE_ppa015877mg, partial [Prunus persica]
swissprot
ID Q8JG38
description Fibroblast growth factor receptor 2 OS=Danio rerio GN=fgfr2 PE=1 SV=1
trembl
ID M5XNL1
description Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015877mg PE=4 SV=1
Gene Ontology
ID GO:0004674
description g-type lectin s-receptor-like serine threonine-protein kinase at1g61370

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005380_040 0.0 - - hypothetical protein PRUPE_ppa015877mg, partial [Prunus persica]
2 Hb_004724_070 0.1252865559 transcription factor TF Family: bZIP PREDICTED: transcription factor TGA2 isoform X1 [Jatropha curcas]
3 Hb_164010_090 0.1359707663 - - cellulose synthase, putative [Ricinus communis]
4 Hb_004341_010 0.1465409983 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
5 Hb_028207_030 0.1501152103 - - PREDICTED: non-specific lipid-transfer protein 8-like [Citrus sinensis]
6 Hb_000045_180 0.1638372639 - - aquaporin PIP1 [Hevea brasiliensis]
7 Hb_004837_170 0.1667549602 - - PREDICTED: uncharacterized protein LOC105648284 [Jatropha curcas]
8 Hb_000077_460 0.1668116434 - - -
9 Hb_000141_220 0.1686744611 - - PREDICTED: 14 kDa proline-rich protein DC2.15-like [Gossypium raimondii]
10 Hb_135811_060 0.1719072012 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
11 Hb_003439_090 0.1756273579 - - kinase, putative [Ricinus communis]
12 Hb_001021_140 0.1774969059 transcription factor TF Family: C2H2 PREDICTED: protein indeterminate-domain 2-like [Jatropha curcas]
13 Hb_031954_010 0.1789158778 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_140848_010 0.1793544766 - - hypothetical protein POPTR_0014s17480g [Populus trichocarpa]
15 Hb_031862_090 0.1813536416 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like [Jatropha curcas]
16 Hb_000000_060 0.1818112824 - - PREDICTED: wall-associated receptor kinase-like 14 [Jatropha curcas]
17 Hb_002735_010 0.1831052708 - - PREDICTED: CLAVATA3/ESR (CLE)-related protein 44 [Prunus mume]
18 Hb_013914_020 0.1841889667 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
19 Hb_027445_080 0.1847920904 transcription factor TF Family: LOB LOB domain protein 25 [Populus trichocarpa]
20 Hb_017866_020 0.1854418713 transcription factor TF Family: WRKY WRKY transcription factor 40 [Jatropha curcas]

Gene co-expression network

sample Hb_005380_040 Hb_005380_040 Hb_004724_070 Hb_004724_070 Hb_005380_040--Hb_004724_070 Hb_164010_090 Hb_164010_090 Hb_005380_040--Hb_164010_090 Hb_004341_010 Hb_004341_010 Hb_005380_040--Hb_004341_010 Hb_028207_030 Hb_028207_030 Hb_005380_040--Hb_028207_030 Hb_000045_180 Hb_000045_180 Hb_005380_040--Hb_000045_180 Hb_004837_170 Hb_004837_170 Hb_005380_040--Hb_004837_170 Hb_004724_070--Hb_004837_170 Hb_002282_030 Hb_002282_030 Hb_004724_070--Hb_002282_030 Hb_004724_070--Hb_028207_030 Hb_000891_060 Hb_000891_060 Hb_004724_070--Hb_000891_060 Hb_000616_060 Hb_000616_060 Hb_004724_070--Hb_000616_060 Hb_000575_010 Hb_000575_010 Hb_004724_070--Hb_000575_010 Hb_000141_220 Hb_000141_220 Hb_164010_090--Hb_000141_220 Hb_004195_170 Hb_004195_170 Hb_164010_090--Hb_004195_170 Hb_017866_020 Hb_017866_020 Hb_164010_090--Hb_017866_020 Hb_000589_180 Hb_000589_180 Hb_164010_090--Hb_000589_180 Hb_000844_010 Hb_000844_010 Hb_164010_090--Hb_000844_010 Hb_031954_010 Hb_031954_010 Hb_004341_010--Hb_031954_010 Hb_004341_010--Hb_004837_170 Hb_002762_070 Hb_002762_070 Hb_004341_010--Hb_002762_070 Hb_000077_460 Hb_000077_460 Hb_004341_010--Hb_000077_460 Hb_004341_010--Hb_028207_030 Hb_001283_010 Hb_001283_010 Hb_004341_010--Hb_001283_010 Hb_028207_030--Hb_000077_460 Hb_028207_030--Hb_002762_070 Hb_028207_030--Hb_031954_010 Hb_031862_090 Hb_031862_090 Hb_028207_030--Hb_031862_090 Hb_027445_080 Hb_027445_080 Hb_028207_030--Hb_027445_080 Hb_000045_180--Hb_000077_460 Hb_003439_090 Hb_003439_090 Hb_000045_180--Hb_003439_090 Hb_013914_020 Hb_013914_020 Hb_000045_180--Hb_013914_020 Hb_000045_180--Hb_017866_020 Hb_003938_010 Hb_003938_010 Hb_000045_180--Hb_003938_010 Hb_002007_140 Hb_002007_140 Hb_000045_180--Hb_002007_140 Hb_004837_170--Hb_027445_080 Hb_004837_170--Hb_002762_070 Hb_004837_170--Hb_031954_010 Hb_004837_170--Hb_002282_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.32657 0.0133219 0.67276 0 0.118849
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.06979 0.0629946

CAGE analysis