Hb_005389_100

Information

Type -
Description -
Location Contig5389: 113701-116516
Sequence    

Annotation

kegg
ID pop:POPTR_0018s09070g
description POPTRDRAFT_737629; hypothetical protein
nr
ID XP_012076739.1
description PREDICTED: methyltransferase-like protein 5 isoform X2 [Jatropha curcas]
swissprot
ID Q8K1A0
description Methyltransferase-like protein 5 OS=Mus musculus GN=Mettl5 PE=2 SV=2
trembl
ID A0A067KC72
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07278 PE=4 SV=1
Gene Ontology
ID GO:0003676
description methyltransferase-like protein 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_47717: 113704-116567
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005389_100 0.0 - - PREDICTED: methyltransferase-like protein 5 isoform X2 [Jatropha curcas]
2 Hb_000329_590 0.0731110862 - - catalytic, putative [Ricinus communis]
3 Hb_004648_090 0.0807954633 - - peroxisomal biogenesis factor, putative [Ricinus communis]
4 Hb_000098_140 0.0877627616 - - hypothetical protein JCGZ_04989 [Jatropha curcas]
5 Hb_002067_030 0.0884966929 - - PREDICTED: poly(ADP-ribose) glycohydrolase 1-like isoform X2 [Jatropha curcas]
6 Hb_001671_040 0.0978192657 - - PREDICTED: serine/arginine-rich splicing factor RS31-like isoform X1 [Populus euphratica]
7 Hb_000525_100 0.0981644135 - - PREDICTED: protease Do-like 9 [Jatropha curcas]
8 Hb_000260_680 0.0984587015 - - PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2-A [Jatropha curcas]
9 Hb_001776_060 0.1004979778 - - PREDICTED: methyl-CpG-binding domain-containing protein 5-like [Jatropha curcas]
10 Hb_004128_200 0.1005461014 - - PREDICTED: uncharacterized protein LOC105642137 [Jatropha curcas]
11 Hb_002228_110 0.1020556967 - - cytochrome b5 isoform Cb5-B [Vernicia fordii]
12 Hb_006615_050 0.1040665857 - - PREDICTED: uncharacterized protein LOC105640686 [Jatropha curcas]
13 Hb_010998_040 0.1043075055 transcription factor TF Family: MYB myb3r3, putative [Ricinus communis]
14 Hb_001636_050 0.106313354 transcription factor TF Family: NF-X1 nuclear transcription factor, X-box binding, putative [Ricinus communis]
15 Hb_154580_010 0.1069466052 - - hypothetical protein PRUPE_ppa002109mg [Prunus persica]
16 Hb_032202_080 0.1074672119 - - PREDICTED: peroxisome biogenesis protein 16-like isoform X1 [Jatropha curcas]
17 Hb_002615_120 0.1097666473 - - PREDICTED: rho GTPase-activating protein 7 isoform X1 [Jatropha curcas]
18 Hb_005288_080 0.1097735788 - - conserved hypothetical protein [Ricinus communis]
19 Hb_006261_090 0.1105331646 - - PREDICTED: exosome complex exonuclease RRP46 homolog [Jatropha curcas]
20 Hb_003579_050 0.1120312978 - - PREDICTED: 14-3-3 protein 7 [Jatropha curcas]

Gene co-expression network

sample Hb_005389_100 Hb_005389_100 Hb_000329_590 Hb_000329_590 Hb_005389_100--Hb_000329_590 Hb_004648_090 Hb_004648_090 Hb_005389_100--Hb_004648_090 Hb_000098_140 Hb_000098_140 Hb_005389_100--Hb_000098_140 Hb_002067_030 Hb_002067_030 Hb_005389_100--Hb_002067_030 Hb_001671_040 Hb_001671_040 Hb_005389_100--Hb_001671_040 Hb_000525_100 Hb_000525_100 Hb_005389_100--Hb_000525_100 Hb_000329_590--Hb_002067_030 Hb_154580_010 Hb_154580_010 Hb_000329_590--Hb_154580_010 Hb_000260_680 Hb_000260_680 Hb_000329_590--Hb_000260_680 Hb_005355_030 Hb_005355_030 Hb_000329_590--Hb_005355_030 Hb_009659_050 Hb_009659_050 Hb_000329_590--Hb_009659_050 Hb_004870_050 Hb_004870_050 Hb_004648_090--Hb_004870_050 Hb_002110_160 Hb_002110_160 Hb_004648_090--Hb_002110_160 Hb_002228_110 Hb_002228_110 Hb_004648_090--Hb_002228_110 Hb_010998_040 Hb_010998_040 Hb_004648_090--Hb_010998_040 Hb_004648_090--Hb_001671_040 Hb_000098_140--Hb_002067_030 Hb_002615_120 Hb_002615_120 Hb_000098_140--Hb_002615_120 Hb_001636_050 Hb_001636_050 Hb_000098_140--Hb_001636_050 Hb_032202_080 Hb_032202_080 Hb_000098_140--Hb_032202_080 Hb_000457_230 Hb_000457_230 Hb_000098_140--Hb_000457_230 Hb_000023_320 Hb_000023_320 Hb_000098_140--Hb_000023_320 Hb_002067_030--Hb_154580_010 Hb_002067_030--Hb_001636_050 Hb_002067_030--Hb_000260_680 Hb_013394_030 Hb_013394_030 Hb_002067_030--Hb_013394_030 Hb_000035_250 Hb_000035_250 Hb_001671_040--Hb_000035_250 Hb_001953_070 Hb_001953_070 Hb_001671_040--Hb_001953_070 Hb_006615_050 Hb_006615_050 Hb_001671_040--Hb_006615_050 Hb_008225_090 Hb_008225_090 Hb_001671_040--Hb_008225_090 Hb_000010_110 Hb_000010_110 Hb_001671_040--Hb_000010_110 Hb_009270_040 Hb_009270_040 Hb_000525_100--Hb_009270_040 Hb_005288_080 Hb_005288_080 Hb_000525_100--Hb_005288_080 Hb_000525_100--Hb_002615_120 Hb_003096_060 Hb_003096_060 Hb_000525_100--Hb_003096_060 Hb_000525_100--Hb_032202_080 Hb_000679_340 Hb_000679_340 Hb_000525_100--Hb_000679_340
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
13.8734 18.4304 28.407 10.6105 17.7342 11.8304
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.77817 15.1322 3.33991 8.92383 11.4996

CAGE analysis