Hb_005389_110

Information

Type -
Description -
Location Contig5389: 134740-137226
Sequence    

Annotation

kegg
ID tcc:TCM_037833
description hypothetical protein
nr
ID XP_012076743.1
description PREDICTED: uncharacterized protein LOC105637756 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KPK9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07280 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005389_110 0.0 - - PREDICTED: uncharacterized protein LOC105637756 [Jatropha curcas]
2 Hb_018344_010 0.1630235761 - - PREDICTED: endochitinase 2-like [Populus euphratica]
3 Hb_000270_210 0.1681947253 - - PREDICTED: transcription initiation factor IIB-2-like [Jatropha curcas]
4 Hb_003929_060 0.2311949281 - - PREDICTED: uncharacterized protein ECU03_1610 [Jatropha curcas]
5 Hb_000402_010 0.2413545773 transcription factor TF Family: HB PREDICTED: homeobox protein knotted-1-like 6 [Jatropha curcas]
6 Hb_002735_040 0.2495569355 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
7 Hb_000640_150 0.2577092197 transcription factor TF Family: WRKY conserved hypothetical protein [Ricinus communis]
8 Hb_116125_010 0.257954913 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Citrus sinensis]
9 Hb_002299_050 0.2593968939 - - PREDICTED: chalcone--flavonone isomerase isoform X1 [Pyrus x bretschneideri]
10 Hb_000828_040 0.260045881 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
11 Hb_000295_010 0.2616889172 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
12 Hb_000189_420 0.2650401564 - - PREDICTED: uncharacterized protein LOC105647665 [Jatropha curcas]
13 Hb_105085_010 0.2665170353 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
14 Hb_134894_010 0.2721431794 - - PREDICTED: E3 ubiquitin-protein ligase UPL5-like isoform X2 [Gossypium raimondii]
15 Hb_002235_140 0.2738962484 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000375_370 0.2766961723 - - Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor, putative [Ricinus communis]
17 Hb_039894_010 0.2789689605 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
18 Hb_000021_100 0.2851737271 - - -
19 Hb_002918_090 0.2863713851 - - PREDICTED: auxin-repressed 12.5 kDa protein-like [Nelumbo nucifera]
20 Hb_001677_050 0.2864086561 desease resistance Gene Name: NB-ARC Disease resistance protein RPP8, putative [Ricinus communis]

Gene co-expression network

sample Hb_005389_110 Hb_005389_110 Hb_018344_010 Hb_018344_010 Hb_005389_110--Hb_018344_010 Hb_000270_210 Hb_000270_210 Hb_005389_110--Hb_000270_210 Hb_003929_060 Hb_003929_060 Hb_005389_110--Hb_003929_060 Hb_000402_010 Hb_000402_010 Hb_005389_110--Hb_000402_010 Hb_002735_040 Hb_002735_040 Hb_005389_110--Hb_002735_040 Hb_000640_150 Hb_000640_150 Hb_005389_110--Hb_000640_150 Hb_003534_040 Hb_003534_040 Hb_018344_010--Hb_003534_040 Hb_116125_010 Hb_116125_010 Hb_018344_010--Hb_116125_010 Hb_018344_010--Hb_000270_210 Hb_105085_010 Hb_105085_010 Hb_018344_010--Hb_105085_010 Hb_001632_010 Hb_001632_010 Hb_018344_010--Hb_001632_010 Hb_000270_210--Hb_000640_150 Hb_002232_150 Hb_002232_150 Hb_000270_210--Hb_002232_150 Hb_000270_210--Hb_116125_010 Hb_000270_210--Hb_002735_040 Hb_000061_040 Hb_000061_040 Hb_003929_060--Hb_000061_040 Hb_114261_010 Hb_114261_010 Hb_003929_060--Hb_114261_010 Hb_000828_040 Hb_000828_040 Hb_003929_060--Hb_000828_040 Hb_002235_140 Hb_002235_140 Hb_003929_060--Hb_002235_140 Hb_000160_200 Hb_000160_200 Hb_003929_060--Hb_000160_200 Hb_004788_040 Hb_004788_040 Hb_000402_010--Hb_004788_040 Hb_001269_040 Hb_001269_040 Hb_000402_010--Hb_001269_040 Hb_002273_050 Hb_002273_050 Hb_000402_010--Hb_002273_050 Hb_134894_010 Hb_134894_010 Hb_000402_010--Hb_134894_010 Hb_009848_030 Hb_009848_030 Hb_000402_010--Hb_009848_030 Hb_002735_040--Hb_105085_010 Hb_002804_050 Hb_002804_050 Hb_002735_040--Hb_002804_050 Hb_006615_100 Hb_006615_100 Hb_002735_040--Hb_006615_100 Hb_002843_050 Hb_002843_050 Hb_002735_040--Hb_002843_050 Hb_005122_060 Hb_005122_060 Hb_002735_040--Hb_005122_060 Hb_012384_050 Hb_012384_050 Hb_002735_040--Hb_012384_050 Hb_012404_040 Hb_012404_040 Hb_000640_150--Hb_012404_040 Hb_000003_390 Hb_000003_390 Hb_000640_150--Hb_000003_390 Hb_007846_040 Hb_007846_040 Hb_000640_150--Hb_007846_040 Hb_010261_010 Hb_010261_010 Hb_000640_150--Hb_010261_010 Hb_003157_010 Hb_003157_010 Hb_000640_150--Hb_003157_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.8307 1.63841 0 0.298649 2.13013 3.25871
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.314054 0.176446 0 3.95057 0

CAGE analysis