Hb_005391_040

Information

Type -
Description -
Location Contig5391: 40400-42432
Sequence    

Annotation

kegg
ID rcu:RCOM_1004050
description acyl-CoA thioesterase, putative
nr
ID XP_012084233.1
description PREDICTED: 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 [Jatropha curcas]
swissprot
ID Q9SX65
description 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 OS=Arabidopsis thaliana GN=DHNAT1 PE=1 SV=1
trembl
ID A0A067JYY4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19108 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_47744: 40444-42380
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005391_040 0.0 - - PREDICTED: 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 [Jatropha curcas]
2 Hb_150651_040 0.0643854445 - - PREDICTED: random slug protein 5-like [Jatropha curcas]
3 Hb_004734_040 0.073596827 - - eukaryotic translation initiation factor 5A isoform I [Hevea brasiliensis]
4 Hb_089995_010 0.07438097 - - PREDICTED: phosphatidylinositol glycan anchor biosynthesis class U protein-like [Eucalyptus grandis]
5 Hb_007894_060 0.0796997378 - - PREDICTED: ubiquitin thioesterase OTU1 [Jatropha curcas]
6 Hb_007928_030 0.0829806476 - - PREDICTED: dual specificity phosphatase Cdc25 [Jatropha curcas]
7 Hb_000465_390 0.0837937932 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L3 [Jatropha curcas]
8 Hb_002301_150 0.0867602101 - - Drought-responsive family protein [Theobroma cacao]
9 Hb_005245_080 0.0874940746 - - PREDICTED: uncharacterized protein LOC105643645 isoform X2 [Jatropha curcas]
10 Hb_001269_610 0.0884103657 - - Chaperone protein dnaJ 8, chloroplast precursor, putative [Ricinus communis]
11 Hb_062226_140 0.0903019662 - - PREDICTED: protein NEDD1 [Jatropha curcas]
12 Hb_001703_060 0.0905339106 - - protein kinase, putative [Ricinus communis]
13 Hb_008013_050 0.091571316 transcription factor TF Family: PHD PREDICTED: PHD finger protein At1g33420 [Jatropha curcas]
14 Hb_007894_170 0.0926487725 - - PREDICTED: UPF0136 membrane protein At2g26240-like [Jatropha curcas]
15 Hb_000431_170 0.0940816408 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein 511 [Jatropha curcas]
16 Hb_028396_010 0.0946261287 - - PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Vitis vinifera]
17 Hb_000982_090 0.0993057418 - - PREDICTED: zinc finger HIT domain-containing protein 3 [Jatropha curcas]
18 Hb_006059_050 0.0999693754 - - PREDICTED: polyadenylate-binding protein 1 [Jatropha curcas]
19 Hb_000331_470 0.1002770989 - - PREDICTED: uncharacterized protein LOC105136689 [Populus euphratica]
20 Hb_001140_370 0.1004295596 - - PREDICTED: uncharacterized protein LOC105648463 [Jatropha curcas]

Gene co-expression network

sample Hb_005391_040 Hb_005391_040 Hb_150651_040 Hb_150651_040 Hb_005391_040--Hb_150651_040 Hb_004734_040 Hb_004734_040 Hb_005391_040--Hb_004734_040 Hb_089995_010 Hb_089995_010 Hb_005391_040--Hb_089995_010 Hb_007894_060 Hb_007894_060 Hb_005391_040--Hb_007894_060 Hb_007928_030 Hb_007928_030 Hb_005391_040--Hb_007928_030 Hb_000465_390 Hb_000465_390 Hb_005391_040--Hb_000465_390 Hb_005245_080 Hb_005245_080 Hb_150651_040--Hb_005245_080 Hb_000529_030 Hb_000529_030 Hb_150651_040--Hb_000529_030 Hb_000457_180 Hb_000457_180 Hb_150651_040--Hb_000457_180 Hb_001279_080 Hb_001279_080 Hb_150651_040--Hb_001279_080 Hb_150651_040--Hb_000465_390 Hb_000903_060 Hb_000903_060 Hb_004734_040--Hb_000903_060 Hb_001653_020 Hb_001653_020 Hb_004734_040--Hb_001653_020 Hb_004734_040--Hb_007894_060 Hb_001301_110 Hb_001301_110 Hb_004734_040--Hb_001301_110 Hb_000665_050 Hb_000665_050 Hb_004734_040--Hb_000665_050 Hb_089995_010--Hb_005245_080 Hb_006907_130 Hb_006907_130 Hb_089995_010--Hb_006907_130 Hb_172426_040 Hb_172426_040 Hb_089995_010--Hb_172426_040 Hb_003918_010 Hb_003918_010 Hb_089995_010--Hb_003918_010 Hb_000015_040 Hb_000015_040 Hb_089995_010--Hb_000015_040 Hb_007894_060--Hb_007928_030 Hb_000538_120 Hb_000538_120 Hb_007894_060--Hb_000538_120 Hb_007894_060--Hb_001301_110 Hb_002301_150 Hb_002301_150 Hb_007894_060--Hb_002301_150 Hb_000136_260 Hb_000136_260 Hb_007894_060--Hb_000136_260 Hb_000069_720 Hb_000069_720 Hb_007894_060--Hb_000069_720 Hb_011344_120 Hb_011344_120 Hb_007928_030--Hb_011344_120 Hb_001386_040 Hb_001386_040 Hb_007928_030--Hb_001386_040 Hb_007928_030--Hb_000538_120 Hb_000431_170 Hb_000431_170 Hb_007928_030--Hb_000431_170 Hb_005914_170 Hb_005914_170 Hb_007928_030--Hb_005914_170 Hb_000465_390--Hb_001386_040 Hb_006693_020 Hb_006693_020 Hb_000465_390--Hb_006693_020 Hb_000465_390--Hb_000431_170 Hb_001863_430 Hb_001863_430 Hb_000465_390--Hb_001863_430 Hb_000465_390--Hb_000529_030 Hb_000948_160 Hb_000948_160 Hb_000465_390--Hb_000948_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
45.4059 26.1597 44.3343 62.82 33.5068 35.4505
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
104.202 83.5052 38.4789 57.34 36.3103

CAGE analysis