Hb_005398_050

Information

Type -
Description -
Location Contig5398: 59474-60789
Sequence    

Annotation

kegg
ID rcu:RCOM_0945530
description electron transporter, putative
nr
ID XP_012084880.1
description PREDICTED: uncharacterized protein LOC105644215 isoform X1 [Jatropha curcas]
swissprot
ID Q9FLE8
description Uncharacterized protein At5g39865 OS=Arabidopsis thaliana GN=At5g39865 PE=2 SV=1
trembl
ID A0A067JT39
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22035 PE=4 SV=1
Gene Ontology
ID GO:0044699
description glutaredoxin family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005398_050 0.0 - - PREDICTED: uncharacterized protein LOC105644215 isoform X1 [Jatropha curcas]
2 Hb_003847_060 0.0658625071 - - syntaxin, putative [Ricinus communis]
3 Hb_000527_020 0.0776871625 - - PREDICTED: uncharacterized protein LOC105649490 [Jatropha curcas]
4 Hb_078448_010 0.0805019877 - - hypothetical protein L484_017526 [Morus notabilis]
5 Hb_000035_230 0.0824384321 - - PREDICTED: early nodulin-like protein 1 [Jatropha curcas]
6 Hb_001307_150 0.0868686548 - - receptor protein kinase, putative [Ricinus communis]
7 Hb_016898_020 0.0877207486 transcription factor TF Family: SET PREDICTED: uncharacterized protein LOC105120899 [Populus euphratica]
8 Hb_009113_060 0.0893853394 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000890_140 0.0900786113 - - PREDICTED: uncharacterized protein LOC105646185 [Jatropha curcas]
10 Hb_000856_390 0.0920021435 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001950_090 0.0924540371 - - PREDICTED: microtubule-associated protein RP/EB family member 1C [Jatropha curcas]
12 Hb_000538_290 0.0932839512 - - hypothetical protein RCOM_0303940 [Ricinus communis]
13 Hb_000116_050 0.0935082156 - - PREDICTED: G2/mitotic-specific cyclin-2-like isoform X2 [Jatropha curcas]
14 Hb_118282_020 0.09439437 - - PREDICTED: uncharacterized protein LOC105631532 isoform X3 [Jatropha curcas]
15 Hb_009113_020 0.0947804697 - - PREDICTED: probable polygalacturonase non-catalytic subunit JP650 [Jatropha curcas]
16 Hb_000480_060 0.0950165978 - - PREDICTED: kinesin-like protein NACK1 [Jatropha curcas]
17 Hb_021576_050 0.0971990038 - - PREDICTED: early nodulin-like protein 1 [Jatropha curcas]
18 Hb_000345_450 0.0972613963 - - PREDICTED: microtubule-binding protein TANGLED [Jatropha curcas]
19 Hb_128392_010 0.0990219679 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein At3g19184 isoform X1 [Jatropha curcas]
20 Hb_006573_310 0.0996798354 - - Tellurite resistance protein tehA, putative [Ricinus communis]

Gene co-expression network

sample Hb_005398_050 Hb_005398_050 Hb_003847_060 Hb_003847_060 Hb_005398_050--Hb_003847_060 Hb_000527_020 Hb_000527_020 Hb_005398_050--Hb_000527_020 Hb_078448_010 Hb_078448_010 Hb_005398_050--Hb_078448_010 Hb_000035_230 Hb_000035_230 Hb_005398_050--Hb_000035_230 Hb_001307_150 Hb_001307_150 Hb_005398_050--Hb_001307_150 Hb_016898_020 Hb_016898_020 Hb_005398_050--Hb_016898_020 Hb_003847_060--Hb_001307_150 Hb_001950_090 Hb_001950_090 Hb_003847_060--Hb_001950_090 Hb_001699_270 Hb_001699_270 Hb_003847_060--Hb_001699_270 Hb_000856_390 Hb_000856_390 Hb_003847_060--Hb_000856_390 Hb_000480_060 Hb_000480_060 Hb_003847_060--Hb_000480_060 Hb_000890_140 Hb_000890_140 Hb_000527_020--Hb_000890_140 Hb_128392_010 Hb_128392_010 Hb_000527_020--Hb_128392_010 Hb_021576_050 Hb_021576_050 Hb_000527_020--Hb_021576_050 Hb_001390_040 Hb_001390_040 Hb_000527_020--Hb_001390_040 Hb_006573_310 Hb_006573_310 Hb_000527_020--Hb_006573_310 Hb_078448_010--Hb_006573_310 Hb_078448_010--Hb_000527_020 Hb_000056_290 Hb_000056_290 Hb_078448_010--Hb_000056_290 Hb_118282_020 Hb_118282_020 Hb_078448_010--Hb_118282_020 Hb_004774_080 Hb_004774_080 Hb_078448_010--Hb_004774_080 Hb_001247_060 Hb_001247_060 Hb_000035_230--Hb_001247_060 Hb_000089_090 Hb_000089_090 Hb_000035_230--Hb_000089_090 Hb_000035_230--Hb_003847_060 Hb_012092_040 Hb_012092_040 Hb_000035_230--Hb_012092_040 Hb_000035_230--Hb_128392_010 Hb_001307_150--Hb_000856_390 Hb_001307_150--Hb_000480_060 Hb_001307_150--Hb_016898_020 Hb_001307_150--Hb_001699_270 Hb_000345_450 Hb_000345_450 Hb_001307_150--Hb_000345_450 Hb_016898_020--Hb_000856_390 Hb_009113_060 Hb_009113_060 Hb_016898_020--Hb_009113_060 Hb_016898_020--Hb_000480_060 Hb_000116_050 Hb_000116_050 Hb_016898_020--Hb_000116_050 Hb_000317_120 Hb_000317_120 Hb_016898_020--Hb_000317_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.162487 7.3468 5.55737 0.0157995 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.460626 0.376943

CAGE analysis