Hb_005408_110

Information

Type -
Description -
Location Contig5408: 154915-156618
Sequence    

Annotation

kegg
ID rcu:RCOM_0215710
description purine permease, putative
nr
ID XP_002533721.1
description purine permease, putative [Ricinus communis]
swissprot
ID Q9SRK7
description Adenine/guanine permease AZG1 OS=Arabidopsis thaliana GN=AZG1 PE=2 SV=1
trembl
ID B9T652
description Purine permease, putative OS=Ricinus communis GN=RCOM_0215710 PE=4 SV=1
Gene Ontology
ID GO:0016020
description adenine guanine permease azg1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005408_110 0.0 - - purine permease, putative [Ricinus communis]
2 Hb_001628_040 0.1230474047 - - PREDICTED: beta-galactosidase 13-like [Populus euphratica]
3 Hb_003252_030 0.1413703586 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
4 Hb_003747_080 0.1462512775 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
5 Hb_137821_010 0.148454393 - - hypothetical protein CISIN_1g034189mg [Citrus sinensis]
6 Hb_031822_020 0.1485291673 - - PREDICTED: uncharacterized protein LOC104613080 [Nelumbo nucifera]
7 Hb_120496_010 0.1512382073 - - PREDICTED: CSC1-like protein At1g32090 [Cicer arietinum]
8 Hb_000527_090 0.1541805181 - - serine carboxypeptidase, putative [Ricinus communis]
9 Hb_005183_090 0.1552132649 - - Calcium-binding EF-hand family protein, putative [Theobroma cacao]
10 Hb_000203_110 0.1557183404 - - -
11 Hb_015085_010 0.1579039973 - - hypothetical protein POPTR_0018s11360g [Populus trichocarpa]
12 Hb_001804_020 0.1581496747 - - hypothetical protein POPTR_0006s09110g [Populus trichocarpa]
13 Hb_007441_320 0.1588044096 - - PREDICTED: putative invertase inhibitor [Jatropha curcas]
14 Hb_000629_140 0.1613691915 - - hypothetical protein SORBIDRAFT_04g013083 [Sorghum bicolor]
15 Hb_002701_200 0.1617147395 - - PREDICTED: COBRA-like protein 4 [Jatropha curcas]
16 Hb_147137_010 0.162259189 - - hypothetical protein JCGZ_07229 [Jatropha curcas]
17 Hb_005694_140 0.16303855 - - protein with unknown function [Ricinus communis]
18 Hb_116486_010 0.1643047401 - - MADS-box transcription factor, partial [Sapria himalayana]
19 Hb_017862_040 0.1655501129 - - PREDICTED: pleiotropic drug resistance protein 3-like [Prunus mume]
20 Hb_005463_120 0.165629361 - - gibberellin 20-oxidase, putative [Ricinus communis]

Gene co-expression network

sample Hb_005408_110 Hb_005408_110 Hb_001628_040 Hb_001628_040 Hb_005408_110--Hb_001628_040 Hb_003252_030 Hb_003252_030 Hb_005408_110--Hb_003252_030 Hb_003747_080 Hb_003747_080 Hb_005408_110--Hb_003747_080 Hb_137821_010 Hb_137821_010 Hb_005408_110--Hb_137821_010 Hb_031822_020 Hb_031822_020 Hb_005408_110--Hb_031822_020 Hb_120496_010 Hb_120496_010 Hb_005408_110--Hb_120496_010 Hb_118941_010 Hb_118941_010 Hb_001628_040--Hb_118941_010 Hb_000027_020 Hb_000027_020 Hb_001628_040--Hb_000027_020 Hb_001277_390 Hb_001277_390 Hb_001628_040--Hb_001277_390 Hb_001247_050 Hb_001247_050 Hb_001628_040--Hb_001247_050 Hb_007210_010 Hb_007210_010 Hb_001628_040--Hb_007210_010 Hb_008535_020 Hb_008535_020 Hb_001628_040--Hb_008535_020 Hb_001104_290 Hb_001104_290 Hb_003252_030--Hb_001104_290 Hb_000363_100 Hb_000363_100 Hb_003252_030--Hb_000363_100 Hb_002874_100 Hb_002874_100 Hb_003252_030--Hb_002874_100 Hb_011689_090 Hb_011689_090 Hb_003252_030--Hb_011689_090 Hb_003252_030--Hb_003747_080 Hb_000203_110 Hb_000203_110 Hb_003252_030--Hb_000203_110 Hb_003747_080--Hb_000203_110 Hb_181191_010 Hb_181191_010 Hb_003747_080--Hb_181191_010 Hb_003747_080--Hb_137821_010 Hb_003747_080--Hb_120496_010 Hb_000527_090 Hb_000527_090 Hb_003747_080--Hb_000527_090 Hb_008727_090 Hb_008727_090 Hb_003747_080--Hb_008727_090 Hb_005463_120 Hb_005463_120 Hb_137821_010--Hb_005463_120 Hb_137821_010--Hb_000527_090 Hb_000048_120 Hb_000048_120 Hb_137821_010--Hb_000048_120 Hb_125152_010 Hb_125152_010 Hb_137821_010--Hb_125152_010 Hb_000629_140 Hb_000629_140 Hb_137821_010--Hb_000629_140 Hb_001804_020 Hb_001804_020 Hb_031822_020--Hb_001804_020 Hb_002701_200 Hb_002701_200 Hb_031822_020--Hb_002701_200 Hb_012753_140 Hb_012753_140 Hb_031822_020--Hb_012753_140 Hb_007441_320 Hb_007441_320 Hb_031822_020--Hb_007441_320 Hb_031822_020--Hb_120496_010 Hb_000224_070 Hb_000224_070 Hb_031822_020--Hb_000224_070 Hb_120496_010--Hb_001277_390 Hb_120496_010--Hb_000203_110 Hb_120496_010--Hb_118941_010 Hb_120496_010--Hb_000224_070 Hb_120496_010--Hb_007441_320
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0353743 0.00929877 0.737016 0 0.0103954
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0212441 0 0 0

CAGE analysis