Hb_005433_060

Information

Type -
Description -
Location Contig5433: 47396-56766
Sequence    

Annotation

kegg
ID rcu:RCOM_0842430
description fyve finger-containing phosphoinositide kinase, fyv1, putative (EC:2.7.1.150)
nr
ID XP_012072202.1
description PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Jatropha curcas]
swissprot
ID Q9SSJ8
description Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana GN=FAB1C PE=2 SV=1
trembl
ID A0A067KPH1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04685 PE=4 SV=1
Gene Ontology
ID GO:0000285
description 1-phosphatidylinositol-3-phosphate 5-kinase fab1c

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_47895: 47614-52322 , PASA_asmbl_47896: 53780-54734 , PASA_asmbl_47897: 55207-55514
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005433_060 0.0 - - PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Jatropha curcas]
2 Hb_002631_200 0.1337293875 - - PREDICTED: uncharacterized protein LOC105646171 isoform X2 [Jatropha curcas]
3 Hb_000699_230 0.1363053833 - - Ankyrin repeat family protein, putative [Theobroma cacao]
4 Hb_008511_100 0.1396021102 - - hypothetical protein POPTR_0009s11860g [Populus trichocarpa]
5 Hb_001268_120 0.1427694519 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002153_030 0.1508857862 - - E3 ubiquitin-protein ligase UPL5 [Theobroma cacao]
7 Hb_108329_020 0.1511416933 transcription factor TF Family: EIL ETHYLENE-INSENSITIVE3 protein, putative [Ricinus communis]
8 Hb_000997_180 0.1546309378 - - conserved hypothetical protein [Ricinus communis]
9 Hb_011512_130 0.1564651554 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At2g33170 [Jatropha curcas]
10 Hb_000661_260 0.1579888165 - - PREDICTED: uncharacterized protein LOC105648304 [Jatropha curcas]
11 Hb_023344_160 0.1588218048 - - PREDICTED: uncharacterized protein LOC105644462 [Jatropha curcas]
12 Hb_004934_050 0.1603593314 - - Eukaryotic release factor 1-3 isoform 1 [Theobroma cacao]
13 Hb_000226_080 0.1605843354 - - prephenate dehydrogenase, putative [Ricinus communis]
14 Hb_003327_070 0.162999104 - - PREDICTED: UDP-glycosyltransferase 73B4-like [Jatropha curcas]
15 Hb_145022_010 0.1634206504 - - hypothetical protein JCGZ_22699 [Jatropha curcas]
16 Hb_000922_250 0.1635328186 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
17 Hb_002217_220 0.1636898287 - - hypothetical protein POPTR_0010s15930g [Populus trichocarpa]
18 Hb_001288_070 0.1637305557 - - PREDICTED: aminopeptidase M1-like [Jatropha curcas]
19 Hb_000083_270 0.1653427211 - - PREDICTED: putative uncharacterized protein At4g01020, chloroplastic [Jatropha curcas]
20 Hb_002823_010 0.1658250462 - - -

Gene co-expression network

sample Hb_005433_060 Hb_005433_060 Hb_002631_200 Hb_002631_200 Hb_005433_060--Hb_002631_200 Hb_000699_230 Hb_000699_230 Hb_005433_060--Hb_000699_230 Hb_008511_100 Hb_008511_100 Hb_005433_060--Hb_008511_100 Hb_001268_120 Hb_001268_120 Hb_005433_060--Hb_001268_120 Hb_002153_030 Hb_002153_030 Hb_005433_060--Hb_002153_030 Hb_108329_020 Hb_108329_020 Hb_005433_060--Hb_108329_020 Hb_000083_270 Hb_000083_270 Hb_002631_200--Hb_000083_270 Hb_002631_200--Hb_002153_030 Hb_000009_120 Hb_000009_120 Hb_002631_200--Hb_000009_120 Hb_000571_160 Hb_000571_160 Hb_002631_200--Hb_000571_160 Hb_011861_080 Hb_011861_080 Hb_002631_200--Hb_011861_080 Hb_185830_070 Hb_185830_070 Hb_002631_200--Hb_185830_070 Hb_000997_180 Hb_000997_180 Hb_000699_230--Hb_000997_180 Hb_000110_300 Hb_000110_300 Hb_000699_230--Hb_000110_300 Hb_000699_230--Hb_001268_120 Hb_000625_090 Hb_000625_090 Hb_000699_230--Hb_000625_090 Hb_009193_100 Hb_009193_100 Hb_000699_230--Hb_009193_100 Hb_002915_060 Hb_002915_060 Hb_000699_230--Hb_002915_060 Hb_002097_200 Hb_002097_200 Hb_008511_100--Hb_002097_200 Hb_000953_050 Hb_000953_050 Hb_008511_100--Hb_000953_050 Hb_001288_070 Hb_001288_070 Hb_008511_100--Hb_001288_070 Hb_002572_050 Hb_002572_050 Hb_008511_100--Hb_002572_050 Hb_005496_180 Hb_005496_180 Hb_008511_100--Hb_005496_180 Hb_189208_020 Hb_189208_020 Hb_008511_100--Hb_189208_020 Hb_002217_220 Hb_002217_220 Hb_001268_120--Hb_002217_220 Hb_082741_010 Hb_082741_010 Hb_001268_120--Hb_082741_010 Hb_000120_820 Hb_000120_820 Hb_001268_120--Hb_000120_820 Hb_000490_060 Hb_000490_060 Hb_001268_120--Hb_000490_060 Hb_010407_170 Hb_010407_170 Hb_001268_120--Hb_010407_170 Hb_007904_130 Hb_007904_130 Hb_002153_030--Hb_007904_130 Hb_002391_210 Hb_002391_210 Hb_002153_030--Hb_002391_210 Hb_001170_030 Hb_001170_030 Hb_002153_030--Hb_001170_030 Hb_000402_190 Hb_000402_190 Hb_002153_030--Hb_000402_190 Hb_005081_020 Hb_005081_020 Hb_002153_030--Hb_005081_020 Hb_004993_060 Hb_004993_060 Hb_108329_020--Hb_004993_060 Hb_109002_020 Hb_109002_020 Hb_108329_020--Hb_109002_020 Hb_007044_050 Hb_007044_050 Hb_108329_020--Hb_007044_050 Hb_001486_030 Hb_001486_030 Hb_108329_020--Hb_001486_030 Hb_008770_040 Hb_008770_040 Hb_108329_020--Hb_008770_040 Hb_002311_340 Hb_002311_340 Hb_108329_020--Hb_002311_340
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.102 28.3788 4.2541 9.67206 4.76468 6.62404
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.66173 10.1379 17.1574 25.95 11.2273

CAGE analysis