Hb_005440_040

Information

Type -
Description -
Location Contig5440: 43432-47092
Sequence    

Annotation

kegg
ID pxb:103926517
description microtubule-associated protein 70-5
nr
ID XP_012078091.1
description PREDICTED: microtubule-associated protein 70-5 [Jatropha curcas]
swissprot
ID Q8GYX3
description Microtubule-associated protein 70-5 OS=Arabidopsis thaliana GN=MAP70.5 PE=1 SV=1
trembl
ID A0A067KM70
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13685 PE=4 SV=1
Gene Ontology
ID GO:0008017
description microtubule-associated protein 70-5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_47942: 43200-43776 , PASA_asmbl_47943: 44168-44416 , PASA_asmbl_47944: 45390-45599 , PASA_asmbl_47945: 45827-46048
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005440_040 0.0 - - PREDICTED: microtubule-associated protein 70-5 [Jatropha curcas]
2 Hb_000227_360 0.0617890513 - - PREDICTED: mavicyanin [Jatropha curcas]
3 Hb_007113_060 0.0680642532 - - PREDICTED: rac-like GTP-binding protein RAC2 [Jatropha curcas]
4 Hb_006922_120 0.0689403196 - - hypothetical protein JCGZ_01146 [Jatropha curcas]
5 Hb_003858_010 0.0709098871 - - xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum]
6 Hb_000531_030 0.0744017847 - - conserved hypothetical protein [Ricinus communis]
7 Hb_108090_010 0.0760815302 - - conserved hypothetical protein [Ricinus communis]
8 Hb_006977_010 0.0813433517 - - unnamed protein product [Vitis vinifera]
9 Hb_011344_040 0.087193864 - - PREDICTED: 21 kDa protein [Jatropha curcas]
10 Hb_009151_010 0.0902498882 - - Peroxidase 3 [Morus notabilis]
11 Hb_001104_060 0.0918996235 - - PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Jatropha curcas]
12 Hb_000336_120 0.0982320705 - - PREDICTED: mavicyanin [Populus euphratica]
13 Hb_185608_010 0.0982658738 - - hypothetical protein POPTR_0004s22210g [Populus trichocarpa]
14 Hb_013749_040 0.0989110292 - - PREDICTED: leucine-rich repeat receptor-like protein kinase PXL1 [Jatropha curcas]
15 Hb_093084_030 0.1004621917 - - oleosin2 [Plukenetia volubilis]
16 Hb_005295_030 0.1006369113 - - PREDICTED: uncharacterized protein LOC105645488 [Jatropha curcas]
17 Hb_181908_010 0.1024760073 - - PREDICTED: UDP-glycosyltransferase 73C3 [Jatropha curcas]
18 Hb_012114_090 0.1032986988 - - tubulin beta chain, putative [Ricinus communis]
19 Hb_031984_020 0.1037228585 - - conserved hypothetical protein [Ricinus communis]
20 Hb_162450_010 0.1038141285 - - PREDICTED: glucan endo-1,3-beta-glucosidase 12 [Jatropha curcas]

Gene co-expression network

sample Hb_005440_040 Hb_005440_040 Hb_000227_360 Hb_000227_360 Hb_005440_040--Hb_000227_360 Hb_007113_060 Hb_007113_060 Hb_005440_040--Hb_007113_060 Hb_006922_120 Hb_006922_120 Hb_005440_040--Hb_006922_120 Hb_003858_010 Hb_003858_010 Hb_005440_040--Hb_003858_010 Hb_000531_030 Hb_000531_030 Hb_005440_040--Hb_000531_030 Hb_108090_010 Hb_108090_010 Hb_005440_040--Hb_108090_010 Hb_000227_360--Hb_108090_010 Hb_000227_360--Hb_003858_010 Hb_001456_030 Hb_001456_030 Hb_000227_360--Hb_001456_030 Hb_011344_040 Hb_011344_040 Hb_000227_360--Hb_011344_040 Hb_001357_290 Hb_001357_290 Hb_000227_360--Hb_001357_290 Hb_007113_060--Hb_006922_120 Hb_000816_140 Hb_000816_140 Hb_007113_060--Hb_000816_140 Hb_002311_030 Hb_002311_030 Hb_007113_060--Hb_002311_030 Hb_004162_200 Hb_004162_200 Hb_007113_060--Hb_004162_200 Hb_162450_010 Hb_162450_010 Hb_007113_060--Hb_162450_010 Hb_006977_010 Hb_006977_010 Hb_006922_120--Hb_006977_010 Hb_013749_040 Hb_013749_040 Hb_006922_120--Hb_013749_040 Hb_006922_120--Hb_000816_140 Hb_010883_170 Hb_010883_170 Hb_006922_120--Hb_010883_170 Hb_181908_010 Hb_181908_010 Hb_003858_010--Hb_181908_010 Hb_008008_040 Hb_008008_040 Hb_003858_010--Hb_008008_040 Hb_001454_420 Hb_001454_420 Hb_003858_010--Hb_001454_420 Hb_142204_010 Hb_142204_010 Hb_003858_010--Hb_142204_010 Hb_003858_010--Hb_011344_040 Hb_001104_060 Hb_001104_060 Hb_000531_030--Hb_001104_060 Hb_000531_030--Hb_000227_360 Hb_009151_010 Hb_009151_010 Hb_000531_030--Hb_009151_010 Hb_000531_030--Hb_001456_030 Hb_005116_150 Hb_005116_150 Hb_000531_030--Hb_005116_150 Hb_061700_010 Hb_061700_010 Hb_108090_010--Hb_061700_010 Hb_108090_010--Hb_003858_010 Hb_000130_250 Hb_000130_250 Hb_108090_010--Hb_000130_250 Hb_108090_010--Hb_000531_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.055064 0.456862 5.67214 24.9953 0.0637588 0.0540058
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0504537 0 0 0.0237138 10.9559

CAGE analysis