Hb_005463_050

Information

Type -
Description -
Location Contig5463: 31873-34858
Sequence    

Annotation

kegg
ID cic:CICLE_v10033075mg
description hypothetical protein
nr
ID XP_012070299.1
description PREDICTED: uncharacterized protein LOC105632514 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KTV0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02607 PE=4 SV=1
Gene Ontology
ID GO:0005783
description PREDICTED: uncharacterized protein LOC105632514

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005463_050 0.0 - - PREDICTED: uncharacterized protein LOC105632514 [Jatropha curcas]
2 Hb_000676_260 0.0753644461 - - PREDICTED: uncharacterized protein LOC105639070 [Jatropha curcas]
3 Hb_000538_240 0.1022396937 - - PREDICTED: uncharacterized protein LOC105643073 [Jatropha curcas]
4 Hb_008225_090 0.1099698686 - - PREDICTED: serine/threonine-protein kinase AFC2 isoform X2 [Jatropha curcas]
5 Hb_013738_020 0.1119501522 - - PREDICTED: E3 ubiquitin-protein ligase RING1 [Jatropha curcas]
6 Hb_002936_010 0.1137492096 - - PREDICTED: uncharacterized protein LOC103949110 [Pyrus x bretschneideri]
7 Hb_000086_170 0.1140106103 - - PREDICTED: serine/threonine-protein kinase 19 [Jatropha curcas]
8 Hb_011909_120 0.1140499656 - - Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
9 Hb_001221_110 0.1149500529 transcription factor TF Family: SWI/SNF-BAF60b hypothetical protein JCGZ_11303 [Jatropha curcas]
10 Hb_002320_040 0.1163247981 - - PREDICTED: oligosaccharyltransferase complex subunit ostc [Jatropha curcas]
11 Hb_109484_010 0.116731032 - - PREDICTED: INO80 complex subunit D-like [Jatropha curcas]
12 Hb_000130_270 0.1171853174 - - PREDICTED: malate dehydrogenase, mitochondrial [Jatropha curcas]
13 Hb_000522_150 0.1193332754 - - PREDICTED: uncharacterized protein LOC105646670 [Jatropha curcas]
14 Hb_002192_010 0.1198570894 - - -
15 Hb_000358_230 0.121951034 - - protein phosphatases pp1 regulatory subunit, putative [Ricinus communis]
16 Hb_002272_050 0.1228756713 - - microsomal signal peptidase 23 kD subunit, putative [Ricinus communis]
17 Hb_000270_310 0.1228878924 - - PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit-like [Populus euphratica]
18 Hb_002553_040 0.1232364959 - - PREDICTED: transcription factor bHLH104 [Jatropha curcas]
19 Hb_011671_480 0.1237549849 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000731_220 0.1241915453 - - PREDICTED: derlin-2.2 [Jatropha curcas]

Gene co-expression network

sample Hb_005463_050 Hb_005463_050 Hb_000676_260 Hb_000676_260 Hb_005463_050--Hb_000676_260 Hb_000538_240 Hb_000538_240 Hb_005463_050--Hb_000538_240 Hb_008225_090 Hb_008225_090 Hb_005463_050--Hb_008225_090 Hb_013738_020 Hb_013738_020 Hb_005463_050--Hb_013738_020 Hb_002936_010 Hb_002936_010 Hb_005463_050--Hb_002936_010 Hb_000086_170 Hb_000086_170 Hb_005463_050--Hb_000086_170 Hb_000008_420 Hb_000008_420 Hb_000676_260--Hb_000008_420 Hb_000170_240 Hb_000170_240 Hb_000676_260--Hb_000170_240 Hb_109484_010 Hb_109484_010 Hb_000676_260--Hb_109484_010 Hb_000358_230 Hb_000358_230 Hb_000676_260--Hb_000358_230 Hb_012092_050 Hb_012092_050 Hb_000676_260--Hb_012092_050 Hb_011671_480 Hb_011671_480 Hb_000538_240--Hb_011671_480 Hb_002232_040 Hb_002232_040 Hb_000538_240--Hb_002232_040 Hb_002631_280 Hb_002631_280 Hb_000538_240--Hb_002631_280 Hb_001221_220 Hb_001221_220 Hb_000538_240--Hb_001221_220 Hb_001911_040 Hb_001911_040 Hb_000538_240--Hb_001911_040 Hb_002092_120 Hb_002092_120 Hb_008225_090--Hb_002092_120 Hb_000270_470 Hb_000270_470 Hb_008225_090--Hb_000270_470 Hb_000270_310 Hb_000270_310 Hb_008225_090--Hb_000270_310 Hb_000010_110 Hb_000010_110 Hb_008225_090--Hb_000010_110 Hb_000176_020 Hb_000176_020 Hb_008225_090--Hb_000176_020 Hb_001025_090 Hb_001025_090 Hb_008225_090--Hb_001025_090 Hb_000116_450 Hb_000116_450 Hb_013738_020--Hb_000116_450 Hb_000220_010 Hb_000220_010 Hb_013738_020--Hb_000220_010 Hb_000705_170 Hb_000705_170 Hb_013738_020--Hb_000705_170 Hb_013738_020--Hb_002936_010 Hb_004990_010 Hb_004990_010 Hb_013738_020--Hb_004990_010 Hb_002110_080 Hb_002110_080 Hb_013738_020--Hb_002110_080 Hb_024958_010 Hb_024958_010 Hb_002936_010--Hb_024958_010 Hb_006570_080 Hb_006570_080 Hb_002936_010--Hb_006570_080 Hb_001359_050 Hb_001359_050 Hb_002936_010--Hb_001359_050 Hb_005588_060 Hb_005588_060 Hb_002936_010--Hb_005588_060 Hb_000720_040 Hb_000720_040 Hb_002936_010--Hb_000720_040 Hb_003994_230 Hb_003994_230 Hb_002936_010--Hb_003994_230 Hb_000086_170--Hb_000270_310 Hb_004312_010 Hb_004312_010 Hb_000086_170--Hb_004312_010 Hb_161574_020 Hb_161574_020 Hb_000086_170--Hb_161574_020 Hb_014720_120 Hb_014720_120 Hb_000086_170--Hb_014720_120 Hb_000336_210 Hb_000336_210 Hb_000086_170--Hb_000336_210 Hb_002272_050 Hb_002272_050 Hb_000086_170--Hb_002272_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.3884 18.8418 21.4602 25.3922 13.8531 12.1128
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
18.7765 25.1024 5.26916 16.5901 6.53197

CAGE analysis