Hb_005470_010

Information

Type -
Description -
Location Contig5470: 8266-9507
Sequence    

Annotation

kegg
ID pop:POPTR_0015s09820g
description POPTRDRAFT_733451; hypothetical protein
nr
ID XP_012079946.1
description PREDICTED: protein-L-isoaspartate O-methyltransferase 1 isoform X2 [Jatropha curcas]
swissprot
ID Q42539
description Protein-L-isoaspartate O-methyltransferase 1 OS=Arabidopsis thaliana GN=PIMT1 PE=1 SV=3
trembl
ID A0A067KFG1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11381 PE=4 SV=1
Gene Ontology
ID GO:0005829
description protein-l-isoaspartate o-methyltransferase 1 isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005470_010 0.0 - - PREDICTED: protein-L-isoaspartate O-methyltransferase 1 isoform X2 [Jatropha curcas]
2 Hb_000895_040 0.1846880933 - - -
3 Hb_040506_010 0.1896250641 - - protein binding protein, putative [Ricinus communis]
4 Hb_000033_060 0.2056295551 - - PREDICTED: uncharacterized protein LOC105111554 isoform X1 [Populus euphratica]
5 Hb_072912_010 0.2119354046 - - PREDICTED: uncharacterized protein LOC105641750 [Jatropha curcas]
6 Hb_002960_120 0.2208791574 - - PREDICTED: uncharacterized protein LOC105635318 [Jatropha curcas]
7 Hb_009193_130 0.2216819206 - - hypothetical protein RCOM_1620550 [Ricinus communis]
8 Hb_007545_210 0.2237040594 transcription factor TF Family: C2C2-Dof PREDICTED: cyclic dof factor 3-like [Jatropha curcas]
9 Hb_098315_100 0.2272691858 - - PREDICTED: uncharacterized protein LOC105636025 isoform X1 [Jatropha curcas]
10 Hb_032006_010 0.2274044235 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
11 Hb_002243_040 0.2280654899 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_00227 [Jatropha curcas]
12 Hb_000856_100 0.2289368033 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4 [Jatropha curcas]
13 Hb_007158_030 0.2333923994 - - UDP-glucosyltransferase, putative [Ricinus communis]
14 Hb_000523_020 0.2335593064 - - PREDICTED: uncharacterized protein LOC105650610 [Jatropha curcas]
15 Hb_000270_400 0.2344467538 - - lipase, putative [Ricinus communis]
16 Hb_000155_080 0.2352924604 - - guanylate-binding family protein [Populus trichocarpa]
17 Hb_000009_640 0.2371279481 transcription factor TF Family: C2C2-Dof hypothetical protein JCGZ_12318 [Jatropha curcas]
18 Hb_004254_040 0.2380047547 - - PREDICTED: uncharacterized protein LOC105650678 [Jatropha curcas]
19 Hb_126669_010 0.2386308069 transcription factor TF Family: bHLH lMYC4 [Hevea brasiliensis]
20 Hb_002506_110 0.2413134261 - - PREDICTED: thaumatin-like protein 1b [Jatropha curcas]

Gene co-expression network

sample Hb_005470_010 Hb_005470_010 Hb_000895_040 Hb_000895_040 Hb_005470_010--Hb_000895_040 Hb_040506_010 Hb_040506_010 Hb_005470_010--Hb_040506_010 Hb_000033_060 Hb_000033_060 Hb_005470_010--Hb_000033_060 Hb_072912_010 Hb_072912_010 Hb_005470_010--Hb_072912_010 Hb_002960_120 Hb_002960_120 Hb_005470_010--Hb_002960_120 Hb_009193_130 Hb_009193_130 Hb_005470_010--Hb_009193_130 Hb_010402_020 Hb_010402_020 Hb_000895_040--Hb_010402_020 Hb_000895_040--Hb_040506_010 Hb_000523_020 Hb_000523_020 Hb_000895_040--Hb_000523_020 Hb_000270_400 Hb_000270_400 Hb_000895_040--Hb_000270_400 Hb_001195_110 Hb_001195_110 Hb_000895_040--Hb_001195_110 Hb_000186_100 Hb_000186_100 Hb_040506_010--Hb_000186_100 Hb_007382_040 Hb_007382_040 Hb_040506_010--Hb_007382_040 Hb_000733_040 Hb_000733_040 Hb_040506_010--Hb_000733_040 Hb_004307_040 Hb_004307_040 Hb_040506_010--Hb_004307_040 Hb_000033_060--Hb_009193_130 Hb_002627_060 Hb_002627_060 Hb_000033_060--Hb_002627_060 Hb_000856_100 Hb_000856_100 Hb_000033_060--Hb_000856_100 Hb_098315_100 Hb_098315_100 Hb_000033_060--Hb_098315_100 Hb_002506_110 Hb_002506_110 Hb_000033_060--Hb_002506_110 Hb_002253_110 Hb_002253_110 Hb_000033_060--Hb_002253_110 Hb_002301_020 Hb_002301_020 Hb_072912_010--Hb_002301_020 Hb_001425_120 Hb_001425_120 Hb_072912_010--Hb_001425_120 Hb_000907_100 Hb_000907_100 Hb_072912_010--Hb_000907_100 Hb_000155_070 Hb_000155_070 Hb_072912_010--Hb_000155_070 Hb_000720_180 Hb_000720_180 Hb_072912_010--Hb_000720_180 Hb_000155_080 Hb_000155_080 Hb_072912_010--Hb_000155_080 Hb_094437_070 Hb_094437_070 Hb_002960_120--Hb_094437_070 Hb_003906_110 Hb_003906_110 Hb_002960_120--Hb_003906_110 Hb_004884_060 Hb_004884_060 Hb_002960_120--Hb_004884_060 Hb_007545_210 Hb_007545_210 Hb_002960_120--Hb_007545_210 Hb_000085_340 Hb_000085_340 Hb_002960_120--Hb_000085_340 Hb_019654_070 Hb_019654_070 Hb_002960_120--Hb_019654_070 Hb_029464_010 Hb_029464_010 Hb_009193_130--Hb_029464_010 Hb_007158_030 Hb_007158_030 Hb_009193_130--Hb_007158_030 Hb_009193_130--Hb_000856_100 Hb_005271_030 Hb_005271_030 Hb_009193_130--Hb_005271_030 Hb_009193_130--Hb_098315_100 Hb_009193_130--Hb_002506_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.887505 0.0405315 0 0 0.281367 0.713643
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.221739 0 0.301819 0.0358704 0

CAGE analysis