Hb_005488_070

Information

Type -
Description -
Location Contig5488: 68676-69770
Sequence    

Annotation

kegg
ID dosa:Os10t0514300-00
description Os10g0514300; Similar to Transposon protein.
nr
ID AAG13516.1
description putative cytochrome P450 [Oryza sativa Japonica Group]
swissprot
ID C7J3A2
description Ent-kaurene oxidase-like protein 1 OS=Oryza sativa subsp. japonica GN=CYP701A7 PE=5 SV=1
trembl
ID Q9FW84
description Putative cytochrome P450 OS=Oryza sativa subsp. japonica GN=OSJNBa0026L12.29 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 89a2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_48114: 68628-80625
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005488_070 0.0 - - putative cytochrome P450 [Oryza sativa Japonica Group]
2 Hb_000208_240 0.0802563525 - - PREDICTED: uncharacterized protein LOC105631307 [Jatropha curcas]
3 Hb_003656_030 0.0889979602 - - PREDICTED: mechanosensitive ion channel protein 8-like [Jatropha curcas]
4 Hb_019613_020 0.0946103127 - - phospholipase C, putative [Ricinus communis]
5 Hb_009510_030 0.0948506352 - - PREDICTED: phosphoinositide phospholipase C 2-like [Jatropha curcas]
6 Hb_035524_030 0.0993492277 - - conserved hypothetical protein [Ricinus communis]
7 Hb_003627_020 0.100760872 - - PREDICTED: probable calcium-binding protein CML49 [Jatropha curcas]
8 Hb_003404_030 0.1010548545 - - PREDICTED: monogalactosyldiacylglycerol synthase 2, chloroplastic-like isoform X1 [Jatropha curcas]
9 Hb_000027_270 0.1030207427 - - PREDICTED: zinc finger protein 6 [Jatropha curcas]
10 Hb_002506_010 0.1038316344 - - choline transporter-related family protein [Populus trichocarpa]
11 Hb_004126_010 0.1050695731 - - PREDICTED: serine/threonine-protein kinase HT1 [Jatropha curcas]
12 Hb_000988_050 0.1096395419 - - conserved hypothetical protein [Ricinus communis]
13 Hb_026048_090 0.1106916229 - - conserved hypothetical protein [Ricinus communis]
14 Hb_127979_010 0.11085108 - - PREDICTED: uncharacterized protein LOC105629383 [Jatropha curcas]
15 Hb_176022_020 0.1110176546 - - cytochrome P450, putative [Ricinus communis]
16 Hb_000057_060 0.1114199835 - - PREDICTED: uncharacterized protein LOC105634990 isoform X4 [Jatropha curcas]
17 Hb_001017_090 0.1120769302 - - -
18 Hb_006816_360 0.1122186639 - - PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 3 [Jatropha curcas]
19 Hb_024714_030 0.1136353767 - - PREDICTED: sm-like protein LSM4 [Jatropha curcas]
20 Hb_000085_280 0.1154875674 - - PREDICTED: beta-(1,2)-xylosyltransferase [Jatropha curcas]

Gene co-expression network

sample Hb_005488_070 Hb_005488_070 Hb_000208_240 Hb_000208_240 Hb_005488_070--Hb_000208_240 Hb_003656_030 Hb_003656_030 Hb_005488_070--Hb_003656_030 Hb_019613_020 Hb_019613_020 Hb_005488_070--Hb_019613_020 Hb_009510_030 Hb_009510_030 Hb_005488_070--Hb_009510_030 Hb_035524_030 Hb_035524_030 Hb_005488_070--Hb_035524_030 Hb_003627_020 Hb_003627_020 Hb_005488_070--Hb_003627_020 Hb_000988_050 Hb_000988_050 Hb_000208_240--Hb_000988_050 Hb_000208_240--Hb_003656_030 Hb_176022_020 Hb_176022_020 Hb_000208_240--Hb_176022_020 Hb_002506_010 Hb_002506_010 Hb_000208_240--Hb_002506_010 Hb_003404_030 Hb_003404_030 Hb_000208_240--Hb_003404_030 Hb_007178_010 Hb_007178_010 Hb_003656_030--Hb_007178_010 Hb_019654_070 Hb_019654_070 Hb_003656_030--Hb_019654_070 Hb_003656_030--Hb_003627_020 Hb_004126_010 Hb_004126_010 Hb_003656_030--Hb_004126_010 Hb_019613_020--Hb_035524_030 Hb_127979_010 Hb_127979_010 Hb_019613_020--Hb_127979_010 Hb_000085_280 Hb_000085_280 Hb_019613_020--Hb_000085_280 Hb_019613_020--Hb_176022_020 Hb_019613_020--Hb_003404_030 Hb_000057_060 Hb_000057_060 Hb_019613_020--Hb_000057_060 Hb_009510_030--Hb_004126_010 Hb_009510_030--Hb_002506_010 Hb_026048_090 Hb_026048_090 Hb_009510_030--Hb_026048_090 Hb_000771_140 Hb_000771_140 Hb_009510_030--Hb_000771_140 Hb_009510_030--Hb_000057_060 Hb_003001_030 Hb_003001_030 Hb_009510_030--Hb_003001_030 Hb_035524_030--Hb_000085_280 Hb_005288_120 Hb_005288_120 Hb_035524_030--Hb_005288_120 Hb_000671_100 Hb_000671_100 Hb_035524_030--Hb_000671_100 Hb_024714_030 Hb_024714_030 Hb_035524_030--Hb_024714_030 Hb_035524_030--Hb_127979_010 Hb_003627_020--Hb_004126_010 Hb_003507_020 Hb_003507_020 Hb_003627_020--Hb_003507_020 Hb_003627_020--Hb_007178_010 Hb_003627_020--Hb_009510_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
168.749 17.1376 2.24452 40.2746 220.494 279.942
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
156.426 90.6036 137.227 40.9525 5.94246

CAGE analysis