Hb_005488_100

Information

Type -
Description -
Location Contig5488: 79276-80536
Sequence    

Annotation

kegg
ID vvi:100262745
description cytochrome P450 89A9-like
nr
ID KDP42498.1
description hypothetical protein JCGZ_00295 [Jatropha curcas]
swissprot
ID O81972
description Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1
trembl
ID A0A067L5H8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00295 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 89a2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_48114: 68628-80625
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005488_100 0.0 - - hypothetical protein JCGZ_00295 [Jatropha curcas]
2 Hb_010931_100 0.0692018855 - - PREDICTED: uncharacterized protein LOC105638669 [Jatropha curcas]
3 Hb_002067_160 0.0744106374 - - Protein MLO, putative [Ricinus communis]
4 Hb_002609_260 0.0745497109 - - CCCH-type zinc finger protein [Hevea brasiliensis]
5 Hb_007178_010 0.0801629734 - - pseudo-hevein [Hevea brasiliensis]
6 Hb_000264_190 0.0845579389 - - sphingolipid delta 4 desaturase/C-4 hydroxylase protein des2, putative [Ricinus communis]
7 Hb_002232_180 0.0895421695 - - PREDICTED: DUF21 domain-containing protein At2g14520-like isoform X1 [Populus euphratica]
8 Hb_026048_090 0.0914729348 - - conserved hypothetical protein [Ricinus communis]
9 Hb_005730_020 0.094682735 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF3.1-like [Jatropha curcas]
10 Hb_001017_090 0.0947325733 - - -
11 Hb_009510_030 0.0948514716 - - PREDICTED: phosphoinositide phospholipase C 2-like [Jatropha curcas]
12 Hb_004545_150 0.095187481 - - PREDICTED: paramyosin [Jatropha curcas]
13 Hb_004738_090 0.095266137 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000085_340 0.0959531524 - - PREDICTED: uncharacterized protein LOC105633038 isoform X1 [Jatropha curcas]
15 Hb_019654_070 0.0979184518 - - PREDICTED: probable alpha-amylase 2 [Jatropha curcas]
16 Hb_000563_540 0.1009571143 - - PREDICTED: Fanconi anemia group I protein [Jatropha curcas]
17 Hb_004126_010 0.1013968539 - - PREDICTED: serine/threonine-protein kinase HT1 [Jatropha curcas]
18 Hb_027751_020 0.1022389089 - - PREDICTED: uncharacterized protein LOC104886652 [Beta vulgaris subsp. vulgaris]
19 Hb_000057_060 0.1032555757 - - PREDICTED: uncharacterized protein LOC105634990 isoform X4 [Jatropha curcas]
20 Hb_001476_100 0.1061831054 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_005488_100 Hb_005488_100 Hb_010931_100 Hb_010931_100 Hb_005488_100--Hb_010931_100 Hb_002067_160 Hb_002067_160 Hb_005488_100--Hb_002067_160 Hb_002609_260 Hb_002609_260 Hb_005488_100--Hb_002609_260 Hb_007178_010 Hb_007178_010 Hb_005488_100--Hb_007178_010 Hb_000264_190 Hb_000264_190 Hb_005488_100--Hb_000264_190 Hb_002232_180 Hb_002232_180 Hb_005488_100--Hb_002232_180 Hb_010931_100--Hb_000264_190 Hb_010931_100--Hb_002609_260 Hb_004545_150 Hb_004545_150 Hb_010931_100--Hb_004545_150 Hb_000563_540 Hb_000563_540 Hb_010931_100--Hb_000563_540 Hb_027751_020 Hb_027751_020 Hb_010931_100--Hb_027751_020 Hb_000085_340 Hb_000085_340 Hb_002067_160--Hb_000085_340 Hb_004738_090 Hb_004738_090 Hb_002067_160--Hb_004738_090 Hb_002067_160--Hb_007178_010 Hb_026048_090 Hb_026048_090 Hb_002067_160--Hb_026048_090 Hb_002067_160--Hb_002232_180 Hb_002609_260--Hb_000264_190 Hb_005730_020 Hb_005730_020 Hb_002609_260--Hb_005730_020 Hb_002609_260--Hb_027751_020 Hb_002609_260--Hb_000563_540 Hb_007178_010--Hb_002232_180 Hb_007810_040 Hb_007810_040 Hb_007178_010--Hb_007810_040 Hb_003906_110 Hb_003906_110 Hb_007178_010--Hb_003906_110 Hb_007178_010--Hb_010931_100 Hb_000264_190--Hb_000563_540 Hb_000264_190--Hb_005730_020 Hb_009510_030 Hb_009510_030 Hb_000264_190--Hb_009510_030 Hb_002890_220 Hb_002890_220 Hb_000264_190--Hb_002890_220 Hb_002232_180--Hb_007810_040 Hb_002232_180--Hb_002609_260 Hb_002232_180--Hb_004738_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.28001 0.103051 0.0366158 0.157344 3.05565 3.7814
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.82894 1.54027 2.43185 0.499686 0.174317

CAGE analysis