Hb_005496_090

Information

Type -
Description -
Location Contig5496: 76398-80657
Sequence    

Annotation

kegg
ID rcu:RCOM_1587610
description Adenine phosphoribosyltransferase, putative (EC:2.4.2.7)
nr
ID XP_012068236.1
description PREDICTED: adenine phosphoribosyltransferase 1-like [Jatropha curcas]
swissprot
ID P31166
description Adenine phosphoribosyltransferase 1, chloroplastic OS=Arabidopsis thaliana GN=APT1 PE=1 SV=2
trembl
ID A0A067L336
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16040 PE=3 SV=1
Gene Ontology
ID GO:0005737
description adenine phosphoribosyltransferase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_48213: 76716-78701 , PASA_asmbl_48214: 76734-80306 , PASA_asmbl_48215: 77172-80258 , PASA_asmbl_48216: 79420-79749
cDNA
(Sanger)
(ID:Location)		 020_G13.ab1: 76796-78701

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005496_090 0.0 - - PREDICTED: adenine phosphoribosyltransferase 1-like [Jatropha curcas]
2 Hb_130719_010 0.0717080109 - - V-type proton ATPase subunit E [Hevea brasiliensis]
3 Hb_000056_250 0.1016466683 - - PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3 [Jatropha curcas]
4 Hb_000016_170 0.1050060579 - - conserved hypothetical protein [Ricinus communis]
5 Hb_138585_040 0.1053531674 - - PREDICTED: proteasome subunit alpha type-4 [Jatropha curcas]
6 Hb_083380_010 0.1077939711 - - -
7 Hb_003291_020 0.1086060349 - - PREDICTED: ATP synthase subunit delta', mitochondrial [Jatropha curcas]
8 Hb_148209_010 0.115180126 - - RAS-related GTP-binding family protein [Populus trichocarpa]
9 Hb_005167_030 0.1166003504 - - PREDICTED: serine/threonine-protein kinase At5g01020-like, partial [Camelina sativa]
10 Hb_003880_040 0.1201563625 - - hypothetical protein POPTR_0001s30770g [Populus trichocarpa]
11 Hb_000815_290 0.1225457153 - - PREDICTED: uncharacterized protein At1g04910 isoform X2 [Jatropha curcas]
12 Hb_005054_260 0.1227755266 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 7 homolog A [Jatropha curcas]
13 Hb_000946_100 0.1251749807 - - PREDICTED: SKI/DACH domain-containing protein 1-like [Jatropha curcas]
14 Hb_000049_050 0.1252518308 - - PREDICTED: uncharacterized protein LOC105644474 [Jatropha curcas]
15 Hb_145880_020 0.1260554292 - - PREDICTED: proteasome subunit alpha type-4 [Jatropha curcas]
16 Hb_005278_040 0.1261539467 - - PREDICTED: sorcin-like isoform X1 [Populus euphratica]
17 Hb_077399_010 0.128472395 - - hypothetical protein POPTR_0003s09910g [Populus trichocarpa]
18 Hb_001410_060 0.1303512561 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 8 homolog A-like [Jatropha curcas]
19 Hb_000436_030 0.1303942618 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000574_130 0.1306047543 - - calcineurin-like protein [Hevea brasiliensis]

Gene co-expression network

sample Hb_005496_090 Hb_005496_090 Hb_130719_010 Hb_130719_010 Hb_005496_090--Hb_130719_010 Hb_000056_250 Hb_000056_250 Hb_005496_090--Hb_000056_250 Hb_000016_170 Hb_000016_170 Hb_005496_090--Hb_000016_170 Hb_138585_040 Hb_138585_040 Hb_005496_090--Hb_138585_040 Hb_083380_010 Hb_083380_010 Hb_005496_090--Hb_083380_010 Hb_003291_020 Hb_003291_020 Hb_005496_090--Hb_003291_020 Hb_130719_010--Hb_000056_250 Hb_130719_010--Hb_003291_020 Hb_001123_160 Hb_001123_160 Hb_130719_010--Hb_001123_160 Hb_000685_050 Hb_000685_050 Hb_130719_010--Hb_000685_050 Hb_005054_260 Hb_005054_260 Hb_130719_010--Hb_005054_260 Hb_000096_150 Hb_000096_150 Hb_000056_250--Hb_000096_150 Hb_000056_250--Hb_003291_020 Hb_005278_040 Hb_005278_040 Hb_000056_250--Hb_005278_040 Hb_027751_060 Hb_027751_060 Hb_000056_250--Hb_027751_060 Hb_000417_260 Hb_000417_260 Hb_000056_250--Hb_000417_260 Hb_005167_030 Hb_005167_030 Hb_000016_170--Hb_005167_030 Hb_003880_040 Hb_003880_040 Hb_000016_170--Hb_003880_040 Hb_008642_030 Hb_008642_030 Hb_000016_170--Hb_008642_030 Hb_002154_110 Hb_002154_110 Hb_000016_170--Hb_002154_110 Hb_000946_100 Hb_000946_100 Hb_000016_170--Hb_000946_100 Hb_000049_050 Hb_000049_050 Hb_138585_040--Hb_000049_050 Hb_001172_100 Hb_001172_100 Hb_138585_040--Hb_001172_100 Hb_002324_010 Hb_002324_010 Hb_138585_040--Hb_002324_010 Hb_000384_120 Hb_000384_120 Hb_138585_040--Hb_000384_120 Hb_002631_260 Hb_002631_260 Hb_138585_040--Hb_002631_260 Hb_138585_040--Hb_005278_040 Hb_083380_010--Hb_138585_040 Hb_001157_080 Hb_001157_080 Hb_083380_010--Hb_001157_080 Hb_083380_010--Hb_001172_100 Hb_083380_010--Hb_005278_040 Hb_083380_010--Hb_130719_010 Hb_148209_010 Hb_148209_010 Hb_003291_020--Hb_148209_010 Hb_003291_020--Hb_001123_160 Hb_003291_020--Hb_000384_120 Hb_003126_070 Hb_003126_070 Hb_003291_020--Hb_003126_070 Hb_003880_030 Hb_003880_030 Hb_003291_020--Hb_003880_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.69896 5.31227 7.77709 34.1968 3.61661 5.83104
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.573 45.1107 38.4482 18.8831 16.7641

CAGE analysis