Hb_005539_160

Information

Type -
Description -
Location Contig5539: 100045-105483
Sequence    

Annotation

kegg
ID pmum:103321739
description aldehyde dehydrogenase family 2 member B7, mitochondrial
nr
ID XP_012085348.1
description PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Jatropha curcas]
swissprot
ID Q9SU63
description Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=2 SV=1
trembl
ID A0A067K2T2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17723 PE=3 SV=1
Gene Ontology
ID GO:0016620
description aldehyde dehydrogenase family 2 member mitochondrial-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_48381: 100330-103317
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005539_160 0.0 - - PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Jatropha curcas]
2 Hb_002422_040 0.1340335748 - - hypothetical protein POPTR_0016s02350g [Populus trichocarpa]
3 Hb_000365_300 0.1392575051 - - PREDICTED: cytochrome P450 714C2-like [Jatropha curcas]
4 Hb_000522_040 0.142280565 - - Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis]
5 Hb_002758_040 0.145790977 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_000251_100 0.1473343361 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
7 Hb_011382_030 0.1494059249 - - Dehydration-responsive protein RD22 precursor, putative [Ricinus communis]
8 Hb_003677_010 0.153452067 transcription factor TF Family: SRS PREDICTED: protein SHI RELATED SEQUENCE 1 [Jatropha curcas]
9 Hb_002234_150 0.1543621713 - - (S)-N-methylcoclaurine 3'-hydroxylase isozyme, putative [Ricinus communis]
10 Hb_004185_040 0.1570438317 - - polygalacturonase, putative [Ricinus communis]
11 Hb_001080_310 0.1576716126 - - PREDICTED: ent-copalyl diphosphate synthase, chloroplastic [Jatropha curcas]
12 Hb_000025_020 0.1601458147 - - PREDICTED: cytochrome P450 71B34-like [Jatropha curcas]
13 Hb_002281_070 0.1625240007 - - hypothetical protein JCGZ_04352 [Jatropha curcas]
14 Hb_001621_140 0.1649919784 - - PREDICTED: glycerol-3-phosphate acyltransferase 5 [Jatropha curcas]
15 Hb_005653_020 0.1654200426 transcription factor TF Family: C2H2 TRANSPARENT TESTA 1 protein, putative [Ricinus communis]
16 Hb_007163_020 0.1679501945 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
17 Hb_004195_040 0.1680018666 - - salicylic acid methyl transferase [Capsicum annuum]
18 Hb_005731_080 0.1690020955 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
19 Hb_012019_030 0.1702612217 - - hypothetical protein POPTR_0005s23360g [Populus trichocarpa]
20 Hb_010712_020 0.171260224 - - PREDICTED: caffeic acid 3-O-methyltransferase-like [Jatropha curcas]

Gene co-expression network

sample Hb_005539_160 Hb_005539_160 Hb_002422_040 Hb_002422_040 Hb_005539_160--Hb_002422_040 Hb_000365_300 Hb_000365_300 Hb_005539_160--Hb_000365_300 Hb_000522_040 Hb_000522_040 Hb_005539_160--Hb_000522_040 Hb_002758_040 Hb_002758_040 Hb_005539_160--Hb_002758_040 Hb_000251_100 Hb_000251_100 Hb_005539_160--Hb_000251_100 Hb_011382_030 Hb_011382_030 Hb_005539_160--Hb_011382_030 Hb_002422_040--Hb_000365_300 Hb_004185_040 Hb_004185_040 Hb_002422_040--Hb_004185_040 Hb_002234_150 Hb_002234_150 Hb_002422_040--Hb_002234_150 Hb_002311_050 Hb_002311_050 Hb_002422_040--Hb_002311_050 Hb_004195_040 Hb_004195_040 Hb_002422_040--Hb_004195_040 Hb_059162_010 Hb_059162_010 Hb_002422_040--Hb_059162_010 Hb_000365_300--Hb_002311_050 Hb_005731_080 Hb_005731_080 Hb_000365_300--Hb_005731_080 Hb_001141_170 Hb_001141_170 Hb_000365_300--Hb_001141_170 Hb_001080_310 Hb_001080_310 Hb_000365_300--Hb_001080_310 Hb_012019_030 Hb_012019_030 Hb_000365_300--Hb_012019_030 Hb_001621_140 Hb_001621_140 Hb_000522_040--Hb_001621_140 Hb_005653_020 Hb_005653_020 Hb_000522_040--Hb_005653_020 Hb_006446_060 Hb_006446_060 Hb_000522_040--Hb_006446_060 Hb_000522_040--Hb_002234_150 Hb_000522_040--Hb_000251_100 Hb_009012_020 Hb_009012_020 Hb_000522_040--Hb_009012_020 Hb_016172_010 Hb_016172_010 Hb_002758_040--Hb_016172_010 Hb_010712_020 Hb_010712_020 Hb_002758_040--Hb_010712_020 Hb_000160_230 Hb_000160_230 Hb_002758_040--Hb_000160_230 Hb_001999_220 Hb_001999_220 Hb_002758_040--Hb_001999_220 Hb_027402_120 Hb_027402_120 Hb_002758_040--Hb_027402_120 Hb_007810_140 Hb_007810_140 Hb_002758_040--Hb_007810_140 Hb_000251_100--Hb_001080_310 Hb_005511_050 Hb_005511_050 Hb_000251_100--Hb_005511_050 Hb_000251_100--Hb_002758_040 Hb_000251_100--Hb_002234_150 Hb_000251_100--Hb_004185_040 Hb_000251_100--Hb_004195_040 Hb_011382_030--Hb_002758_040 Hb_145535_010 Hb_145535_010 Hb_011382_030--Hb_145535_010 Hb_003446_030 Hb_003446_030 Hb_011382_030--Hb_003446_030 Hb_011382_030--Hb_027402_120 Hb_000141_210 Hb_000141_210 Hb_011382_030--Hb_000141_210 Hb_011382_030--Hb_000160_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.91981 28.1317 0.389863 3.65249 0.399685 3.25766
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.239139 0.275023 0.137864 101.228 0.276674

CAGE analysis