Hb_005539_280

Information

Type -
Description -
Location Contig5539: 216688-221902
Sequence    

Annotation

kegg
ID rcu:RCOM_0463840
description triacylglycerol lipase, putative
nr
ID XP_012085340.1
description PREDICTED: uncharacterized protein LOC105644562 [Jatropha curcas]
swissprot
ID P0C1S9
description Sn1-specific diacylglycerol lipase beta OS=Rattus norvegicus GN=Daglb PE=1 SV=1
trembl
ID A0A067JRN8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17715 PE=4 SV=1
Gene Ontology
ID GO:0006629
description alpha beta-hydrolases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_48395: 216694-221860 , PASA_asmbl_48396: 222622-222894
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005539_280 0.0 - - PREDICTED: uncharacterized protein LOC105644562 [Jatropha curcas]
2 Hb_001726_020 0.0391332554 - - PREDICTED: endophilin-A1 [Jatropha curcas]
3 Hb_000504_140 0.0550371258 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter B family member 26, chloroplastic-like [Jatropha curcas]
4 Hb_000250_060 0.058916407 - - PREDICTED: 28S ribosomal protein S29, mitochondrial [Jatropha curcas]
5 Hb_058999_020 0.0687494227 - - PREDICTED: mitochondrial outer membrane import complex protein METAXIN [Jatropha curcas]
6 Hb_001633_050 0.0698425134 - - PREDICTED: histone H2A.Z-specific chaperone CHZ1 [Jatropha curcas]
7 Hb_005779_060 0.0710713283 - - PREDICTED: uncharacterized protein LOC105643212 isoform X2 [Jatropha curcas]
8 Hb_012490_070 0.0730385787 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001758_100 0.0746452554 - - basic helix-loop-helix-containing protein, putative [Ricinus communis]
10 Hb_000768_090 0.0771892196 - - PREDICTED: UTP--glucose-1-phosphate uridylyltransferase isoform X1 [Jatropha curcas]
11 Hb_000120_470 0.0785555828 - - hypothetical protein VITISV_017372 [Vitis vinifera]
12 Hb_007416_320 0.0802374178 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000529_170 0.0811617672 - - hypothetical protein JCGZ_14691 [Jatropha curcas]
14 Hb_000120_460 0.0815611387 - - PREDICTED: thioredoxin reductase NTRB-like [Jatropha curcas]
15 Hb_001633_210 0.0816881046 - - PREDICTED: RING finger protein 10 isoform X2 [Jatropha curcas]
16 Hb_000236_040 0.0817562005 - - PREDICTED: uncharacterized protein LOC105633150 isoform X1 [Jatropha curcas]
17 Hb_010422_060 0.0827584785 - - PREDICTED: GLABRA2 expression modulator [Jatropha curcas]
18 Hb_086639_030 0.0827814572 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
19 Hb_000684_380 0.083440157 - - PREDICTED: 60S ribosomal protein L4 [Vitis vinifera]
20 Hb_004058_030 0.0841475554 - - PREDICTED: stomatin-like protein 2, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_005539_280 Hb_005539_280 Hb_001726_020 Hb_001726_020 Hb_005539_280--Hb_001726_020 Hb_000504_140 Hb_000504_140 Hb_005539_280--Hb_000504_140 Hb_000250_060 Hb_000250_060 Hb_005539_280--Hb_000250_060 Hb_058999_020 Hb_058999_020 Hb_005539_280--Hb_058999_020 Hb_001633_050 Hb_001633_050 Hb_005539_280--Hb_001633_050 Hb_005779_060 Hb_005779_060 Hb_005539_280--Hb_005779_060 Hb_001726_020--Hb_000250_060 Hb_001726_020--Hb_000504_140 Hb_001726_020--Hb_005779_060 Hb_000783_020 Hb_000783_020 Hb_001726_020--Hb_000783_020 Hb_000529_170 Hb_000529_170 Hb_001726_020--Hb_000529_170 Hb_001758_100 Hb_001758_100 Hb_000504_140--Hb_001758_100 Hb_000504_140--Hb_005779_060 Hb_000504_140--Hb_001633_050 Hb_000317_240 Hb_000317_240 Hb_000504_140--Hb_000317_240 Hb_005618_170 Hb_005618_170 Hb_000504_140--Hb_005618_170 Hb_001633_210 Hb_001633_210 Hb_000250_060--Hb_001633_210 Hb_000297_010 Hb_000297_010 Hb_000250_060--Hb_000297_010 Hb_010812_120 Hb_010812_120 Hb_000250_060--Hb_010812_120 Hb_002046_180 Hb_002046_180 Hb_000250_060--Hb_002046_180 Hb_000757_060 Hb_000757_060 Hb_058999_020--Hb_000757_060 Hb_058999_020--Hb_005779_060 Hb_000227_080 Hb_000227_080 Hb_058999_020--Hb_000227_080 Hb_000215_110 Hb_000215_110 Hb_058999_020--Hb_000215_110 Hb_000465_460 Hb_000465_460 Hb_058999_020--Hb_000465_460 Hb_002044_080 Hb_002044_080 Hb_058999_020--Hb_002044_080 Hb_004116_190 Hb_004116_190 Hb_001633_050--Hb_004116_190 Hb_000777_040 Hb_000777_040 Hb_001633_050--Hb_000777_040 Hb_002995_020 Hb_002995_020 Hb_001633_050--Hb_002995_020 Hb_000656_240 Hb_000656_240 Hb_001633_050--Hb_000656_240 Hb_001512_030 Hb_001512_030 Hb_001633_050--Hb_001512_030 Hb_000876_070 Hb_000876_070 Hb_005779_060--Hb_000876_070 Hb_000016_250 Hb_000016_250 Hb_005779_060--Hb_000016_250 Hb_005779_060--Hb_002046_180 Hb_002739_100 Hb_002739_100 Hb_005779_060--Hb_002739_100 Hb_000062_220 Hb_000062_220 Hb_005779_060--Hb_000062_220 Hb_002110_150 Hb_002110_150 Hb_005779_060--Hb_002110_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.0208 8.10791 10.2085 7.34905 10.2305 11.1306
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.3122 19.3577 18.8422 14.1914 7.35903

CAGE analysis