Hb_005599_010

Information

Type -
Description -
Location Contig5599: 16915-22179
Sequence    

Annotation

kegg
ID rcu:RCOM_1400680
description Protein MLO, putative
nr
ID XP_002526370.1
description Protein MLO, putative [Ricinus communis]
swissprot
ID Q94KB9
description MLO-like protein 3 OS=Arabidopsis thaliana GN=MLO3 PE=2 SV=1
trembl
ID B9SK51
description MLO-like protein OS=Ricinus communis GN=MLO PE=3 SV=1
Gene Ontology
ID GO:0016021
description mlo-like protein 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005599_010 0.0 - - Protein MLO, putative [Ricinus communis]
2 Hb_004154_010 0.0435631027 - - Rop guanine nucleotide exchange factor, putative [Ricinus communis]
3 Hb_003226_060 0.0815614539 - - Pectinesterase-2 precursor, putative [Ricinus communis]
4 Hb_000397_170 0.0970367461 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002540_100 0.1171192508 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
6 Hb_014549_010 0.1190890134 - - PREDICTED: uncharacterized protein LOC101512634 [Cicer arietinum]
7 Hb_006197_010 0.1251375824 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
8 Hb_003050_170 0.1266865396 - - conserved hypothetical protein [Ricinus communis]
9 Hb_185830_090 0.1313258914 - - conserved hypothetical protein [Ricinus communis]
10 Hb_004297_050 0.1327994339 - - cytochrome P450, putative [Ricinus communis]
11 Hb_096974_010 0.1459463016 - - PREDICTED: uncharacterized protein LOC105123384 isoform X1 [Populus euphratica]
12 Hb_036602_010 0.1461054733 - - PREDICTED: wall-associated receptor kinase 2-like [Jatropha curcas]
13 Hb_003119_040 0.1469891704 - - PREDICTED: classical arabinogalactan protein 1-like [Populus euphratica]
14 Hb_004586_050 0.1533524254 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH30-like [Jatropha curcas]
15 Hb_000256_170 0.1535997394 - - PREDICTED: uncharacterized protein LOC105638320 [Jatropha curcas]
16 Hb_015037_010 0.1594542431 - - PREDICTED: cysteine-rich receptor-like protein kinase 10 [Jatropha curcas]
17 Hb_000574_180 0.1599684413 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
18 Hb_000261_340 0.1614822332 - - PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Jatropha curcas]
19 Hb_025163_020 0.1630399882 - - PREDICTED: probable terpene synthase 13 [Jatropha curcas]
20 Hb_000193_060 0.1637211056 - - PREDICTED: F-box protein At4g35930 [Jatropha curcas]

Gene co-expression network

sample Hb_005599_010 Hb_005599_010 Hb_004154_010 Hb_004154_010 Hb_005599_010--Hb_004154_010 Hb_003226_060 Hb_003226_060 Hb_005599_010--Hb_003226_060 Hb_000397_170 Hb_000397_170 Hb_005599_010--Hb_000397_170 Hb_002540_100 Hb_002540_100 Hb_005599_010--Hb_002540_100 Hb_014549_010 Hb_014549_010 Hb_005599_010--Hb_014549_010 Hb_006197_010 Hb_006197_010 Hb_005599_010--Hb_006197_010 Hb_004154_010--Hb_014549_010 Hb_185830_090 Hb_185830_090 Hb_004154_010--Hb_185830_090 Hb_004154_010--Hb_003226_060 Hb_036602_010 Hb_036602_010 Hb_004154_010--Hb_036602_010 Hb_003050_170 Hb_003050_170 Hb_004154_010--Hb_003050_170 Hb_003226_060--Hb_000397_170 Hb_001754_100 Hb_001754_100 Hb_003226_060--Hb_001754_100 Hb_000574_180 Hb_000574_180 Hb_003226_060--Hb_000574_180 Hb_150745_010 Hb_150745_010 Hb_003226_060--Hb_150745_010 Hb_000397_170--Hb_001754_100 Hb_000397_170--Hb_000574_180 Hb_000397_170--Hb_150745_010 Hb_000256_170 Hb_000256_170 Hb_000397_170--Hb_000256_170 Hb_000371_030 Hb_000371_030 Hb_002540_100--Hb_000371_030 Hb_000856_230 Hb_000856_230 Hb_002540_100--Hb_000856_230 Hb_004316_020 Hb_004316_020 Hb_002540_100--Hb_004316_020 Hb_003847_090 Hb_003847_090 Hb_002540_100--Hb_003847_090 Hb_006873_010 Hb_006873_010 Hb_002540_100--Hb_006873_010 Hb_014549_010--Hb_036602_010 Hb_003489_010 Hb_003489_010 Hb_014549_010--Hb_003489_010 Hb_005701_100 Hb_005701_100 Hb_014549_010--Hb_005701_100 Hb_014549_010--Hb_185830_090 Hb_006721_060 Hb_006721_060 Hb_014549_010--Hb_006721_060 Hb_023712_020 Hb_023712_020 Hb_006197_010--Hb_023712_020 Hb_022465_010 Hb_022465_010 Hb_006197_010--Hb_022465_010 Hb_137862_020 Hb_137862_020 Hb_006197_010--Hb_137862_020 Hb_057721_010 Hb_057721_010 Hb_006197_010--Hb_057721_010 Hb_000170_260 Hb_000170_260 Hb_006197_010--Hb_000170_260 Hb_019429_020 Hb_019429_020 Hb_006197_010--Hb_019429_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0253011 0.0861718 0.0556173 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00908729 0

CAGE analysis