Hb_005605_030

Information

Type -
Description -
Location Contig5605: 27444-29609
Sequence    

Annotation

kegg
ID cam:101494126
description probable LRR receptor-like serine/threonine-protein kinase At3g47570-like
nr
ID KDP44808.1
description hypothetical protein JCGZ_01308 [Jatropha curcas]
swissprot
ID C0LGT6
description LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1
trembl
ID A0A067LC70
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01308 PE=4 SV=1
Gene Ontology
ID GO:0016020
description lrr receptor-like kinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005605_030 0.0 - - hypothetical protein JCGZ_01308 [Jatropha curcas]
2 Hb_000111_150 0.0901377674 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
3 Hb_007407_010 0.0919577348 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 74 [Populus euphratica]
4 Hb_000509_040 0.0968646784 - - hypothetical protein VITISV_009716 [Vitis vinifera]
5 Hb_000028_360 0.1072343412 - - ubiquitin-protein ligase, putative [Ricinus communis]
6 Hb_000133_060 0.1225612362 - - PREDICTED: protein YLS9-like [Jatropha curcas]
7 Hb_002922_010 0.1288197638 - - heavy-metal-associated domain-containing family protein [Populus trichocarpa]
8 Hb_003582_020 0.130740908 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Eucalyptus grandis]
9 Hb_005396_110 0.1307756259 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001568_120 0.1342477931 - - hypothetical protein JCGZ_05918 [Jatropha curcas]
11 Hb_009683_010 0.1352925635 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
12 Hb_004267_070 0.1376358776 - - latex allene oxide synthase [Hevea brasiliensis]
13 Hb_019654_010 0.1414696418 - - multicopper oxidase, putative [Ricinus communis]
14 Hb_007383_050 0.1417792432 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF061 [Jatropha curcas]
15 Hb_025477_020 0.1421213005 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF027 [Jatropha curcas]
16 Hb_018043_010 0.1438997944 - - PREDICTED: auxin-induced protein 15A-like [Jatropha curcas]
17 Hb_001168_100 0.1448511287 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Citrus sinensis]
18 Hb_001289_030 0.1481965855 - - syntaxin, plant, putative [Ricinus communis]
19 Hb_001411_150 0.1497780606 - - Dormancy/auxin associated family protein, putative [Theobroma cacao]
20 Hb_000347_370 0.1508226687 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]

Gene co-expression network

sample Hb_005605_030 Hb_005605_030 Hb_000111_150 Hb_000111_150 Hb_005605_030--Hb_000111_150 Hb_007407_010 Hb_007407_010 Hb_005605_030--Hb_007407_010 Hb_000509_040 Hb_000509_040 Hb_005605_030--Hb_000509_040 Hb_000028_360 Hb_000028_360 Hb_005605_030--Hb_000028_360 Hb_000133_060 Hb_000133_060 Hb_005605_030--Hb_000133_060 Hb_002922_010 Hb_002922_010 Hb_005605_030--Hb_002922_010 Hb_005396_110 Hb_005396_110 Hb_000111_150--Hb_005396_110 Hb_087468_010 Hb_087468_010 Hb_000111_150--Hb_087468_010 Hb_000111_150--Hb_000509_040 Hb_000111_150--Hb_000028_360 Hb_132517_010 Hb_132517_010 Hb_000111_150--Hb_132517_010 Hb_007407_010--Hb_000133_060 Hb_000110_330 Hb_000110_330 Hb_007407_010--Hb_000110_330 Hb_002205_260 Hb_002205_260 Hb_007407_010--Hb_002205_260 Hb_009683_010 Hb_009683_010 Hb_007407_010--Hb_009683_010 Hb_012545_080 Hb_012545_080 Hb_007407_010--Hb_012545_080 Hb_000509_040--Hb_005396_110 Hb_001897_030 Hb_001897_030 Hb_000509_040--Hb_001897_030 Hb_002049_030 Hb_002049_030 Hb_000509_040--Hb_002049_030 Hb_000509_040--Hb_132517_010 Hb_041534_010 Hb_041534_010 Hb_000028_360--Hb_041534_010 Hb_006916_220 Hb_006916_220 Hb_000028_360--Hb_006916_220 Hb_013591_010 Hb_013591_010 Hb_000028_360--Hb_013591_010 Hb_002422_020 Hb_002422_020 Hb_000028_360--Hb_002422_020 Hb_000731_020 Hb_000731_020 Hb_000028_360--Hb_000731_020 Hb_000133_060--Hb_002205_260 Hb_000133_060--Hb_000110_330 Hb_000133_060--Hb_012545_080 Hb_019961_010 Hb_019961_010 Hb_000133_060--Hb_019961_010 Hb_174380_010 Hb_174380_010 Hb_000133_060--Hb_174380_010 Hb_025477_020 Hb_025477_020 Hb_002922_010--Hb_025477_020 Hb_010417_120 Hb_010417_120 Hb_002922_010--Hb_010417_120 Hb_001477_080 Hb_001477_080 Hb_002922_010--Hb_001477_080 Hb_002922_010--Hb_041534_010 Hb_125201_010 Hb_125201_010 Hb_002922_010--Hb_125201_010 Hb_003582_020 Hb_003582_020 Hb_002922_010--Hb_003582_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.25584 0.216616 0.413687 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.120229 0

CAGE analysis