Hb_005622_080

Information

Type -
Description -
Location Contig5622: 71390-72739
Sequence    

Annotation

kegg
ID rcu:RCOM_0899040
description Aspartic proteinase nepenthesin-2 precursor, putative
nr
ID XP_002517617.1
description Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis]
swissprot
ID Q3EBM5
description Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1
trembl
ID B9RV48
description Aspartic proteinase nepenthesin-2, putative OS=Ricinus communis GN=RCOM_0899040 PE=4 SV=1
Gene Ontology
ID GO:0004190
description aspartic proteinase cdr1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005622_080 0.0 - - Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis]
2 Hb_060245_010 0.1477536123 - - -
3 Hb_001814_090 0.1477539084 - - PREDICTED: uncharacterized protein LOC105636644 [Jatropha curcas]
4 Hb_001476_010 0.1477603117 - - hypothetical protein JCGZ_15669 [Jatropha curcas]
5 Hb_012120_010 0.1477657397 - - -
6 Hb_140406_010 0.1477687575 - - hypothetical protein JCGZ_19461 [Jatropha curcas]
7 Hb_032920_080 0.1477739733 - - PREDICTED: uncharacterized protein LOC104602705 [Nelumbo nucifera]
8 Hb_051719_020 0.147784123 - - PREDICTED: toll/interleukin-1 receptor-like protein [Jatropha curcas]
9 Hb_027556_030 0.1478066476 - - PREDICTED: pleiotropic drug resistance protein 1-like, partial [Gossypium raimondii]
10 Hb_001611_030 0.1478217918 - - -
11 Hb_002400_120 0.1478310772 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
12 Hb_003894_130 0.1478524321 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
13 Hb_013405_120 0.1478674826 - - -
14 Hb_001621_080 0.1478816114 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 33 [Jatropha curcas]
15 Hb_001740_010 0.1479031691 - - hypothetical protein JCGZ_18625 [Jatropha curcas]
16 Hb_001568_100 0.1479607655 - - hypothetical protein Csa_2G404850 [Cucumis sativus]
17 Hb_006124_020 0.1480333704 - - hypothetical protein JCGZ_13738 [Jatropha curcas]
18 Hb_002985_020 0.1480636812 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
19 Hb_000036_020 0.1480655843 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
20 Hb_007313_020 0.1481060981 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_005622_080 Hb_005622_080 Hb_060245_010 Hb_060245_010 Hb_005622_080--Hb_060245_010 Hb_001814_090 Hb_001814_090 Hb_005622_080--Hb_001814_090 Hb_001476_010 Hb_001476_010 Hb_005622_080--Hb_001476_010 Hb_012120_010 Hb_012120_010 Hb_005622_080--Hb_012120_010 Hb_140406_010 Hb_140406_010 Hb_005622_080--Hb_140406_010 Hb_032920_080 Hb_032920_080 Hb_005622_080--Hb_032920_080 Hb_060245_010--Hb_001814_090 Hb_060245_010--Hb_001476_010 Hb_060245_010--Hb_012120_010 Hb_060245_010--Hb_140406_010 Hb_060245_010--Hb_032920_080 Hb_051719_020 Hb_051719_020 Hb_060245_010--Hb_051719_020 Hb_001814_090--Hb_001476_010 Hb_001814_090--Hb_032920_080 Hb_001814_090--Hb_012120_010 Hb_001814_090--Hb_140406_010 Hb_001814_090--Hb_051719_020 Hb_001476_010--Hb_012120_010 Hb_001476_010--Hb_140406_010 Hb_001476_010--Hb_051719_020 Hb_027556_030 Hb_027556_030 Hb_001476_010--Hb_027556_030 Hb_012120_010--Hb_140406_010 Hb_012120_010--Hb_051719_020 Hb_012120_010--Hb_027556_030 Hb_140406_010--Hb_051719_020 Hb_140406_010--Hb_027556_030 Hb_001611_030 Hb_001611_030 Hb_140406_010--Hb_001611_030 Hb_032920_080--Hb_001476_010 Hb_032920_080--Hb_012120_010 Hb_032920_080--Hb_140406_010 Hb_032920_080--Hb_051719_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0309488 0.968687 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.051937 0.876845 0

CAGE analysis