Hb_005625_020

Information

Type transcription factor
Description TF Family: bZIP
Location Contig5625: 25874-26742
Sequence    

Annotation

kegg
ID pop:POPTR_0001s22790g
description POPTRDRAFT_549022; hypothetical protein
nr
ID XP_012074718.1
description PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 [Jatropha curcas]
swissprot
ID Q9LES3
description ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Arabidopsis thaliana GN=DPBF3 PE=1 SV=1
trembl
ID A0A067LFH3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14910 PE=4 SV=1
Gene Ontology
ID GO:0003700
description aba-responsive element binding protein 3 isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_48873: 25891-51380
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005625_020 0.0 transcription factor TF Family: bZIP PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 [Jatropha curcas]
2 Hb_000080_190 0.0698543632 - - -
3 Hb_002687_110 0.0746335487 - - PREDICTED: uncharacterized WD repeat-containing protein C343.04c isoform X1 [Jatropha curcas]
4 Hb_002769_050 0.0820113876 - - PREDICTED: endophilin-A1 [Jatropha curcas]
5 Hb_004738_040 0.08404828 - - PREDICTED: serine/threonine-protein kinase EDR1-like isoform X2 [Populus euphratica]
6 Hb_000898_040 0.084593721 - - ankyrin repeat-containing protein, putative [Ricinus communis]
7 Hb_154648_010 0.0853686652 - - PREDICTED: uncharacterized protein LOC105634412 isoform X2 [Jatropha curcas]
8 Hb_000409_020 0.0872975325 - - PREDICTED: V-type proton ATPase subunit d2 [Jatropha curcas]
9 Hb_000207_250 0.0901988418 - - Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis]
10 Hb_008695_210 0.0920689758 - - PREDICTED: serine hydroxymethyltransferase 7 [Jatropha curcas]
11 Hb_000359_010 0.0946150614 - - o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis]
12 Hb_183086_060 0.0957859197 desease resistance Gene Name: AAA PREDICTED: ATPase family AAA domain-containing protein 1-B [Jatropha curcas]
13 Hb_004109_190 0.0989432775 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like isoform X2 [Populus euphratica]
14 Hb_002005_020 0.0998910807 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000000_250 0.1024062208 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g19290 [Jatropha curcas]
16 Hb_003943_040 0.1030559416 - - DNA binding protein, putative [Ricinus communis]
17 Hb_000907_080 0.1031892333 - - PREDICTED: uncharacterized protein LOC105640819 [Jatropha curcas]
18 Hb_000363_160 0.1041379752 - - Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus communis]
19 Hb_006922_030 0.1044278063 - - ubiquitin, putative [Ricinus communis]
20 Hb_064441_010 0.1044881523 - - PREDICTED: MACPF domain-containing protein CAD1-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_005625_020 Hb_005625_020 Hb_000080_190 Hb_000080_190 Hb_005625_020--Hb_000080_190 Hb_002687_110 Hb_002687_110 Hb_005625_020--Hb_002687_110 Hb_002769_050 Hb_002769_050 Hb_005625_020--Hb_002769_050 Hb_004738_040 Hb_004738_040 Hb_005625_020--Hb_004738_040 Hb_000898_040 Hb_000898_040 Hb_005625_020--Hb_000898_040 Hb_154648_010 Hb_154648_010 Hb_005625_020--Hb_154648_010 Hb_000080_190--Hb_002687_110 Hb_000080_190--Hb_000898_040 Hb_000080_190--Hb_004738_040 Hb_009048_040 Hb_009048_040 Hb_000080_190--Hb_009048_040 Hb_000409_020 Hb_000409_020 Hb_000080_190--Hb_000409_020 Hb_000431_010 Hb_000431_010 Hb_002687_110--Hb_000431_010 Hb_002687_110--Hb_004738_040 Hb_001277_330 Hb_001277_330 Hb_002687_110--Hb_001277_330 Hb_002687_110--Hb_000409_020 Hb_003943_040 Hb_003943_040 Hb_002687_110--Hb_003943_040 Hb_002769_050--Hb_002687_110 Hb_001818_090 Hb_001818_090 Hb_002769_050--Hb_001818_090 Hb_003032_040 Hb_003032_040 Hb_002769_050--Hb_003032_040 Hb_002769_050--Hb_000080_190 Hb_000696_310 Hb_000696_310 Hb_002769_050--Hb_000696_310 Hb_000510_320 Hb_000510_320 Hb_004738_040--Hb_000510_320 Hb_004738_040--Hb_001277_330 Hb_004738_040--Hb_000409_020 Hb_004738_040--Hb_000431_010 Hb_000898_040--Hb_000409_020 Hb_002217_300 Hb_002217_300 Hb_000898_040--Hb_002217_300 Hb_000207_250 Hb_000207_250 Hb_000898_040--Hb_000207_250 Hb_000907_080 Hb_000907_080 Hb_000898_040--Hb_000907_080 Hb_004109_090 Hb_004109_090 Hb_000898_040--Hb_004109_090 Hb_000000_250 Hb_000000_250 Hb_154648_010--Hb_000000_250 Hb_006922_110 Hb_006922_110 Hb_154648_010--Hb_006922_110 Hb_003996_020 Hb_003996_020 Hb_154648_010--Hb_003996_020 Hb_004976_030 Hb_004976_030 Hb_154648_010--Hb_004976_030 Hb_003018_190 Hb_003018_190 Hb_154648_010--Hb_003018_190 Hb_006816_140 Hb_006816_140 Hb_154648_010--Hb_006816_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.84222 3.33859 3.47497 7.22589 7.73004 15.1255
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.1767 9.91427 23.6412 6.00624 5.74033

CAGE analysis