Hb_005653_060

Information

Type -
Description -
Location Contig5653: 70393-70914
Sequence    

Annotation

kegg
ID rcu:RCOM_1280190
description zinc finger protein, putative
nr
ID XP_012072807.1
description PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3 [Jatropha curcas]
swissprot
ID Q9ZNU9
description Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Arabidopsis thaliana GN=SAP3 PE=2 SV=1
trembl
ID A0A067KRF9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07939 PE=4 SV=1
Gene Ontology
ID GO:0003677
description zinc finger a20 and an1 domain-containing stress-associated protein 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_48997: 69908-71259
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005653_060 0.0 - - PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3 [Jatropha curcas]
2 Hb_005551_050 0.1011994325 - - PREDICTED: nudix hydrolase 27, chloroplastic [Jatropha curcas]
3 Hb_000635_180 0.1021131057 - - PREDICTED: CTD small phosphatase-like protein 2 isoform X1 [Jatropha curcas]
4 Hb_001564_080 0.1033600842 transcription factor TF Family: NF-YB PREDICTED: protein Dr1 homolog isoform X2 [Jatropha curcas]
5 Hb_007426_180 0.1055920658 - - PREDICTED: probable inositol transporter 2 [Jatropha curcas]
6 Hb_000221_210 0.1064785289 - - Kinase superfamily protein isoform 2 [Theobroma cacao]
7 Hb_003747_220 0.1103687173 - - PREDICTED: syntaxin-22-like isoform X2 [Jatropha curcas]
8 Hb_002685_170 0.1115224396 - - hypothetical protein EUTSA_v10019281mg [Eutrema salsugineum]
9 Hb_005941_040 0.1141270769 - - PREDICTED: CASP-like protein 5A2 [Jatropha curcas]
10 Hb_000031_060 0.1141518614 - - PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Jatropha curcas]
11 Hb_028995_040 0.1143037448 - - PREDICTED: protein MODIFIER OF SNC1 11 isoform X1 [Jatropha curcas]
12 Hb_000445_180 0.1203601065 transcription factor TF Family: TRAF PREDICTED: BTB/POZ domain-containing protein At4g08455 [Jatropha curcas]
13 Hb_002284_010 0.1208316792 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000086_060 0.121057237 - - PREDICTED: TOM1-like protein 2 isoform X2 [Populus euphratica]
15 Hb_002486_040 0.1212660331 - - -
16 Hb_000859_060 0.1218010172 - - PREDICTED: uncharacterized protein LOC105641312 [Jatropha curcas]
17 Hb_000189_560 0.1224050141 transcription factor TF Family: GeBP PREDICTED: mediator-associated protein 1 [Jatropha curcas]
18 Hb_000042_030 0.1224165036 transcription factor TF Family: NAC NAC domain protein, IPR003441 [Theobroma cacao]
19 Hb_005928_110 0.1224338678 - - PREDICTED: PRA1 family protein F2-like [Jatropha curcas]
20 Hb_007590_050 0.1243362502 - - NudC domain-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_005653_060 Hb_005653_060 Hb_005551_050 Hb_005551_050 Hb_005653_060--Hb_005551_050 Hb_000635_180 Hb_000635_180 Hb_005653_060--Hb_000635_180 Hb_001564_080 Hb_001564_080 Hb_005653_060--Hb_001564_080 Hb_007426_180 Hb_007426_180 Hb_005653_060--Hb_007426_180 Hb_000221_210 Hb_000221_210 Hb_005653_060--Hb_000221_210 Hb_003747_220 Hb_003747_220 Hb_005653_060--Hb_003747_220 Hb_005551_050--Hb_007426_180 Hb_003376_350 Hb_003376_350 Hb_005551_050--Hb_003376_350 Hb_000679_090 Hb_000679_090 Hb_005551_050--Hb_000679_090 Hb_005551_050--Hb_001564_080 Hb_004032_270 Hb_004032_270 Hb_005551_050--Hb_004032_270 Hb_002284_010 Hb_002284_010 Hb_000635_180--Hb_002284_010 Hb_002301_140 Hb_002301_140 Hb_000635_180--Hb_002301_140 Hb_028995_040 Hb_028995_040 Hb_000635_180--Hb_028995_040 Hb_005941_040 Hb_005941_040 Hb_000635_180--Hb_005941_040 Hb_030736_080 Hb_030736_080 Hb_000635_180--Hb_030736_080 Hb_001235_190 Hb_001235_190 Hb_000635_180--Hb_001235_190 Hb_001894_050 Hb_001894_050 Hb_001564_080--Hb_001894_050 Hb_189208_020 Hb_189208_020 Hb_001564_080--Hb_189208_020 Hb_001817_160 Hb_001817_160 Hb_001564_080--Hb_001817_160 Hb_115241_010 Hb_115241_010 Hb_001564_080--Hb_115241_010 Hb_007426_180--Hb_000679_090 Hb_001552_020 Hb_001552_020 Hb_007426_180--Hb_001552_020 Hb_000500_100 Hb_000500_100 Hb_007426_180--Hb_000500_100 Hb_002256_030 Hb_002256_030 Hb_007426_180--Hb_002256_030 Hb_007426_180--Hb_003376_350 Hb_000696_340 Hb_000696_340 Hb_000221_210--Hb_000696_340 Hb_000086_060 Hb_000086_060 Hb_000221_210--Hb_000086_060 Hb_000445_180 Hb_000445_180 Hb_000221_210--Hb_000445_180 Hb_002137_020 Hb_002137_020 Hb_000221_210--Hb_002137_020 Hb_000221_210--Hb_005941_040 Hb_003057_100 Hb_003057_100 Hb_000221_210--Hb_003057_100 Hb_000252_150 Hb_000252_150 Hb_003747_220--Hb_000252_150 Hb_001143_130 Hb_001143_130 Hb_003747_220--Hb_001143_130 Hb_003747_220--Hb_000635_180 Hb_000462_130 Hb_000462_130 Hb_003747_220--Hb_000462_130 Hb_000179_070 Hb_000179_070 Hb_003747_220--Hb_000179_070 Hb_004586_140 Hb_004586_140 Hb_003747_220--Hb_004586_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
208.744 252.035 110.033 85.383 98.4982 152.023
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
320.291 242.698 191.373 90.2479 46.3858

CAGE analysis