Hb_005656_140

Information

Type transcription factor
Description TF Family: bZIP
Location Contig5656: 102303-104551
Sequence    

Annotation

kegg
ID pop:POPTR_0006s29250g
description hypothetical protein
nr
ID XP_012076304.1
description PREDICTED: basic leucine zipper 9 [Jatropha curcas]
swissprot
ID Q9FUD3
description Basic leucine zipper 9 OS=Arabidopsis thaliana GN=BZIP9 PE=1 SV=1
trembl
ID A0A067KBB0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06993 PE=4 SV=1
Gene Ontology
ID GO:0005488
description basic leucine zipper 9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49020: 102332-104530
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005656_140 0.0 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 9 [Jatropha curcas]
2 Hb_003494_060 0.1291440633 - - PREDICTED: uncharacterized protein LOC105644062 isoform X1 [Jatropha curcas]
3 Hb_002760_040 0.1303014269 - - PREDICTED: uncharacterized protein LOC105641234 [Jatropha curcas]
4 Hb_009838_060 0.1359490144 - - conserved hypothetical protein [Ricinus communis]
5 Hb_129204_060 0.1414263744 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 20 [Jatropha curcas]
6 Hb_001141_360 0.1472336621 - - PREDICTED: FRIGIDA-like protein 4a [Jatropha curcas]
7 Hb_002235_240 0.1492785832 - - xenotropic and polytropic murine leukemia virus receptor ids-4, putative [Ricinus communis]
8 Hb_001225_090 0.1508836889 transcription factor TF Family: RWP-RK transcription factor, putative [Ricinus communis]
9 Hb_000976_290 0.1583332842 transcription factor TF Family: MYB-related PREDICTED: uncharacterized protein LOC105646228 [Jatropha curcas]
10 Hb_000261_190 0.1592200994 - - PREDICTED: uncharacterized protein At4g04980-like [Jatropha curcas]
11 Hb_000483_040 0.1648390513 - - Cell division protein ftsH, putative [Ricinus communis]
12 Hb_000010_350 0.1650023877 - - PREDICTED: programmed cell death protein 4-like [Jatropha curcas]
13 Hb_009897_020 0.1677858123 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
14 Hb_000638_210 0.1693106487 - - Pectin lyase-like superfamily protein isoform 1 [Theobroma cacao]
15 Hb_000836_120 0.1705145129 - - syntaxin, putative [Ricinus communis]
16 Hb_000062_080 0.1707518322 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator ARR11-like [Jatropha curcas]
17 Hb_000215_410 0.1711833557 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 20 [Jatropha curcas]
18 Hb_002918_150 0.1715664476 transcription factor TF Family: ERF ethylene-responsive element binding protein 1 [Hevea brasiliensis]
19 Hb_003849_260 0.1717728485 - - PREDICTED: uncharacterized protein LOC105644666 [Jatropha curcas]
20 Hb_003155_020 0.1759713798 - - Rpp4C3 [Medicago truncatula]

Gene co-expression network

sample Hb_005656_140 Hb_005656_140 Hb_003494_060 Hb_003494_060 Hb_005656_140--Hb_003494_060 Hb_002760_040 Hb_002760_040 Hb_005656_140--Hb_002760_040 Hb_009838_060 Hb_009838_060 Hb_005656_140--Hb_009838_060 Hb_129204_060 Hb_129204_060 Hb_005656_140--Hb_129204_060 Hb_001141_360 Hb_001141_360 Hb_005656_140--Hb_001141_360 Hb_002235_240 Hb_002235_240 Hb_005656_140--Hb_002235_240 Hb_003494_060--Hb_001141_360 Hb_001865_060 Hb_001865_060 Hb_003494_060--Hb_001865_060 Hb_012725_040 Hb_012725_040 Hb_003494_060--Hb_012725_040 Hb_000483_040 Hb_000483_040 Hb_003494_060--Hb_000483_040 Hb_003494_060--Hb_009838_060 Hb_000062_080 Hb_000062_080 Hb_003494_060--Hb_000062_080 Hb_009897_020 Hb_009897_020 Hb_002760_040--Hb_009897_020 Hb_002760_040--Hb_003494_060 Hb_002686_400 Hb_002686_400 Hb_002760_040--Hb_002686_400 Hb_117895_010 Hb_117895_010 Hb_002760_040--Hb_117895_010 Hb_003155_020 Hb_003155_020 Hb_002760_040--Hb_003155_020 Hb_009838_060--Hb_001141_360 Hb_012760_010 Hb_012760_010 Hb_009838_060--Hb_012760_010 Hb_001546_110 Hb_001546_110 Hb_009838_060--Hb_001546_110 Hb_185513_010 Hb_185513_010 Hb_009838_060--Hb_185513_010 Hb_129204_060--Hb_002235_240 Hb_000215_410 Hb_000215_410 Hb_129204_060--Hb_000215_410 Hb_000836_120 Hb_000836_120 Hb_129204_060--Hb_000836_120 Hb_002273_050 Hb_002273_050 Hb_129204_060--Hb_002273_050 Hb_002686_280 Hb_002686_280 Hb_129204_060--Hb_002686_280 Hb_001141_360--Hb_001865_060 Hb_001141_360--Hb_000062_080 Hb_003120_050 Hb_003120_050 Hb_001141_360--Hb_003120_050 Hb_001141_360--Hb_012725_040 Hb_012226_010 Hb_012226_010 Hb_001141_360--Hb_012226_010 Hb_002235_240--Hb_000836_120 Hb_003849_260 Hb_003849_260 Hb_002235_240--Hb_003849_260 Hb_002235_240--Hb_000215_410 Hb_002235_240--Hb_001141_360 Hb_001863_150 Hb_001863_150 Hb_002235_240--Hb_001863_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
41.1499 430.443 14.4525 61.955 67.4098 61.8648
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
34.5462 41.1387 55.3304 77.6239 12.1518

CAGE analysis