Hb_005656_160

Information

Type -
Description -
Location Contig5656: 117690-118169
Sequence    

Annotation

kegg
ID tcc:TCM_036780
description SAUR family protein
nr
ID XP_012076302.1
description PREDICTED: uncharacterized protein LOC105637448 [Jatropha curcas]
swissprot
ID Q9LTV3
description Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana GN=SAUR72 PE=2 SV=1
trembl
ID A0A067KMA1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06991 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005656_160 0.0 - - PREDICTED: uncharacterized protein LOC105637448 [Jatropha curcas]
2 Hb_002311_110 0.1498998306 - - conserved hypothetical protein [Ricinus communis]
3 Hb_004297_080 0.1632437658 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
4 Hb_001699_030 0.1747860161 transcription factor TF Family: Orphans PREDICTED: histidine kinase 1 isoform X1 [Jatropha curcas]
5 Hb_000666_120 0.1782162251 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
6 Hb_000732_240 0.1840142518 - - PREDICTED: dynein light chain 1, cytoplasmic-like [Jatropha curcas]
7 Hb_049915_010 0.1876890722 - - PREDICTED: uncharacterized serine-rich protein C215.13 [Jatropha curcas]
8 Hb_000003_760 0.1891465946 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA26-like [Jatropha curcas]
9 Hb_000733_090 0.1898440229 - - PREDICTED: putative lipid-transfer protein DIR1 [Jatropha curcas]
10 Hb_030312_010 0.1898675836 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000336_190 0.1917013234 - - PREDICTED: UPF0481 protein At3g47200-like [Gossypium raimondii]
12 Hb_004586_230 0.1921836241 - - conserved hypothetical protein [Ricinus communis]
13 Hb_005056_100 0.1961924385 transcription factor TF Family: AP2 PREDICTED: AP2-like ethylene-responsive transcription factor ANT [Jatropha curcas]
14 Hb_000342_140 0.1968586443 - - PREDICTED: vacuolar-processing enzyme-like [Jatropha curcas]
15 Hb_012760_060 0.1970281988 - - PREDICTED: uncharacterized protein LOC105647085 isoform X1 [Jatropha curcas]
16 Hb_017159_010 0.2010436665 - - -
17 Hb_093177_010 0.2046897906 - - Phosphoprotein phosphatase [Theobroma cacao]
18 Hb_001472_140 0.2050045682 - - PREDICTED: BTB/POZ domain-containing protein At5g41330 [Jatropha curcas]
19 Hb_020967_010 0.2050497597 - - -
20 Hb_000567_220 0.2051026192 - - PREDICTED: uncharacterized protein LOC105116038 [Populus euphratica]

Gene co-expression network

sample Hb_005656_160 Hb_005656_160 Hb_002311_110 Hb_002311_110 Hb_005656_160--Hb_002311_110 Hb_004297_080 Hb_004297_080 Hb_005656_160--Hb_004297_080 Hb_001699_030 Hb_001699_030 Hb_005656_160--Hb_001699_030 Hb_000666_120 Hb_000666_120 Hb_005656_160--Hb_000666_120 Hb_000732_240 Hb_000732_240 Hb_005656_160--Hb_000732_240 Hb_049915_010 Hb_049915_010 Hb_005656_160--Hb_049915_010 Hb_178658_010 Hb_178658_010 Hb_002311_110--Hb_178658_010 Hb_000836_210 Hb_000836_210 Hb_002311_110--Hb_000836_210 Hb_002004_010 Hb_002004_010 Hb_002311_110--Hb_002004_010 Hb_002849_110 Hb_002849_110 Hb_002311_110--Hb_002849_110 Hb_002311_110--Hb_000666_120 Hb_001472_140 Hb_001472_140 Hb_004297_080--Hb_001472_140 Hb_008406_030 Hb_008406_030 Hb_004297_080--Hb_008406_030 Hb_004297_080--Hb_000666_120 Hb_002233_080 Hb_002233_080 Hb_004297_080--Hb_002233_080 Hb_000210_160 Hb_000210_160 Hb_004297_080--Hb_000210_160 Hb_001675_310 Hb_001675_310 Hb_004297_080--Hb_001675_310 Hb_003175_090 Hb_003175_090 Hb_001699_030--Hb_003175_090 Hb_020301_010 Hb_020301_010 Hb_001699_030--Hb_020301_010 Hb_001178_040 Hb_001178_040 Hb_001699_030--Hb_001178_040 Hb_001699_030--Hb_002311_110 Hb_005588_130 Hb_005588_130 Hb_001699_030--Hb_005588_130 Hb_004282_040 Hb_004282_040 Hb_001699_030--Hb_004282_040 Hb_000666_120--Hb_001675_310 Hb_001999_200 Hb_001999_200 Hb_000666_120--Hb_001999_200 Hb_000403_100 Hb_000403_100 Hb_000666_120--Hb_000403_100 Hb_007292_050 Hb_007292_050 Hb_000666_120--Hb_007292_050 Hb_000099_190 Hb_000099_190 Hb_000732_240--Hb_000099_190 Hb_101370_010 Hb_101370_010 Hb_000732_240--Hb_101370_010 Hb_035761_010 Hb_035761_010 Hb_000732_240--Hb_035761_010 Hb_000732_240--Hb_049915_010 Hb_017159_010 Hb_017159_010 Hb_000732_240--Hb_017159_010 Hb_001357_280 Hb_001357_280 Hb_000732_240--Hb_001357_280 Hb_000733_090 Hb_000733_090 Hb_049915_010--Hb_000733_090 Hb_049915_010--Hb_008406_030 Hb_049915_010--Hb_004297_080 Hb_008643_020 Hb_008643_020 Hb_049915_010--Hb_008643_020 Hb_000172_230 Hb_000172_230 Hb_049915_010--Hb_000172_230 Hb_002783_210 Hb_002783_210 Hb_049915_010--Hb_002783_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.122446 1.42989 0.296629 1.5447 0.177003 0.121668
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.112838 0 0.188396 0.208964

CAGE analysis