Hb_005657_010

Information

Type -
Description -
Location Contig5657: 39943-41544
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005657_010 0.0 - - -
2 Hb_011174_070 0.1395640596 - - PREDICTED: pentatricopeptide repeat-containing protein At5g06540-like [Jatropha curcas]
3 Hb_003125_050 0.1436316687 - - PREDICTED: pentatricopeptide repeat-containing protein At5g50390, chloroplastic [Jatropha curcas]
4 Hb_001767_010 0.1508542212 - - PREDICTED: probable RNA helicase SDE3 [Populus euphratica]
5 Hb_001001_160 0.1515938975 - - Phosphatidic acid phosphohydrolase 2 isoform 1 [Theobroma cacao]
6 Hb_011609_190 0.1522239096 - - 14-3-3 protein 2 [Hevea brasiliensis]
7 Hb_003747_240 0.1533779583 transcription factor TF Family: RB conserved hypothetical protein [Ricinus communis]
8 Hb_098993_010 0.1578285282 - - PREDICTED: chaperone protein dnaJ 72 isoform X2 [Jatropha curcas]
9 Hb_000014_100 0.1588091717 - - -
10 Hb_003906_120 0.1613205158 - - -
11 Hb_000733_060 0.1634486519 - - PREDICTED: protein GUCD1 isoform X1 [Jatropha curcas]
12 Hb_001433_170 0.1641026659 - - PREDICTED: topless-related protein 3 isoform X1 [Jatropha curcas]
13 Hb_114684_020 0.164391931 - - beta-1,3-glucanase [Hevea brasiliensis]
14 Hb_000684_370 0.1653052465 - - -
15 Hb_143629_050 0.1670799105 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000789_190 0.1674880481 transcription factor TF Family: NAC hypothetical protein JCGZ_07342 [Jatropha curcas]
17 Hb_000057_060 0.1681600849 - - PREDICTED: uncharacterized protein LOC105634990 isoform X4 [Jatropha curcas]
18 Hb_002973_080 0.1690641917 - - PREDICTED: uncharacterized protein LOC105630313 [Jatropha curcas]
19 Hb_006452_060 0.1699515915 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
20 Hb_000369_060 0.1700171133 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]

Gene co-expression network

sample Hb_005657_010 Hb_005657_010 Hb_011174_070 Hb_011174_070 Hb_005657_010--Hb_011174_070 Hb_003125_050 Hb_003125_050 Hb_005657_010--Hb_003125_050 Hb_001767_010 Hb_001767_010 Hb_005657_010--Hb_001767_010 Hb_001001_160 Hb_001001_160 Hb_005657_010--Hb_001001_160 Hb_011609_190 Hb_011609_190 Hb_005657_010--Hb_011609_190 Hb_003747_240 Hb_003747_240 Hb_005657_010--Hb_003747_240 Hb_003057_120 Hb_003057_120 Hb_011174_070--Hb_003057_120 Hb_000427_030 Hb_000427_030 Hb_011174_070--Hb_000427_030 Hb_000387_080 Hb_000387_080 Hb_011174_070--Hb_000387_080 Hb_000057_060 Hb_000057_060 Hb_011174_070--Hb_000057_060 Hb_000805_090 Hb_000805_090 Hb_011174_070--Hb_000805_090 Hb_000025_480 Hb_000025_480 Hb_011174_070--Hb_000025_480 Hb_000300_530 Hb_000300_530 Hb_003125_050--Hb_000300_530 Hb_000249_110 Hb_000249_110 Hb_003125_050--Hb_000249_110 Hb_023610_010 Hb_023610_010 Hb_003125_050--Hb_023610_010 Hb_003906_120 Hb_003906_120 Hb_003125_050--Hb_003906_120 Hb_003125_050--Hb_001767_010 Hb_114684_020 Hb_114684_020 Hb_001767_010--Hb_114684_020 Hb_001767_010--Hb_000427_030 Hb_001767_010--Hb_011174_070 Hb_003001_030 Hb_003001_030 Hb_001767_010--Hb_003001_030 Hb_001767_010--Hb_000249_110 Hb_000380_180 Hb_000380_180 Hb_001767_010--Hb_000380_180 Hb_000025_200 Hb_000025_200 Hb_001001_160--Hb_000025_200 Hb_010174_130 Hb_010174_130 Hb_001001_160--Hb_010174_130 Hb_000733_060 Hb_000733_060 Hb_001001_160--Hb_000733_060 Hb_000771_110 Hb_000771_110 Hb_001001_160--Hb_000771_110 Hb_000001_020 Hb_000001_020 Hb_001001_160--Hb_000001_020 Hb_002377_040 Hb_002377_040 Hb_001001_160--Hb_002377_040 Hb_000117_040 Hb_000117_040 Hb_011609_190--Hb_000117_040 Hb_000179_250 Hb_000179_250 Hb_011609_190--Hb_000179_250 Hb_012654_020 Hb_012654_020 Hb_011609_190--Hb_012654_020 Hb_001433_170 Hb_001433_170 Hb_011609_190--Hb_001433_170 Hb_002172_030 Hb_002172_030 Hb_011609_190--Hb_002172_030 Hb_000491_080 Hb_000491_080 Hb_011609_190--Hb_000491_080 Hb_000809_040 Hb_000809_040 Hb_003747_240--Hb_000809_040 Hb_000163_290 Hb_000163_290 Hb_003747_240--Hb_000163_290 Hb_003747_240--Hb_011174_070 Hb_006499_010 Hb_006499_010 Hb_003747_240--Hb_006499_010 Hb_000138_040 Hb_000138_040 Hb_003747_240--Hb_000138_040 Hb_003404_030 Hb_003404_030 Hb_003747_240--Hb_003404_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
27.1485 2.55874 3.23629 0.0935315 32.6935 13.4254
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.7473 10.3187 28.7777 4.62605 2.86279

CAGE analysis