Hb_005663_090

Information

Type -
Description -
Location Contig5663: 107761-113636
Sequence    

Annotation

kegg
ID rcu:RCOM_1600190
description alcohol dehydrogenase, putative (EC:1.1.1.284)
nr
ID XP_012073689.1
description PREDICTED: alcohol dehydrogenase-like 7 [Jatropha curcas]
swissprot
ID Q9FH04
description Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1
trembl
ID A0A067KYC0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08135 PE=3 SV=1
Gene Ontology
ID GO:0008270
description alcohol dehydrogenase-like 7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49072: 107709-113543
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005663_090 0.0 - - PREDICTED: alcohol dehydrogenase-like 7 [Jatropha curcas]
2 Hb_001439_010 0.0915753405 - - PREDICTED: anthocyanidin 3-O-glucosyltransferase 5-like [Jatropha curcas]
3 Hb_000337_030 0.0965240494 - - amino acid transporter, putative [Ricinus communis]
4 Hb_000680_070 0.099725573 - - PREDICTED: receptor-like serine/threonine-protein kinase ALE2 isoform X1 [Jatropha curcas]
5 Hb_006469_090 0.1012781979 - - PREDICTED: LOW QUALITY PROTEIN: myosin-11 [Jatropha curcas]
6 Hb_005168_020 0.1016266339 - - PREDICTED: U-box domain-containing protein 30-like [Jatropha curcas]
7 Hb_005731_070 0.1085916463 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000951_090 0.109636755 - - Oligopeptide transporter, putative [Ricinus communis]
9 Hb_021346_020 0.1106995645 - - hypothetical protein JCGZ_26746 [Jatropha curcas]
10 Hb_000152_120 0.1153571422 - - alpha-l-fucosidase, putative [Ricinus communis]
11 Hb_007386_030 0.1179681011 - - PREDICTED: formin-like protein 2 [Jatropha curcas]
12 Hb_005766_010 0.1186163258 - - serine carboxypeptidase, putative [Ricinus communis]
13 Hb_015001_030 0.120239488 - - inosine-uridine preferring nucleoside hydrolase family protein [Populus trichocarpa]
14 Hb_000866_190 0.1213549742 - - transcription factor, putative [Ricinus communis]
15 Hb_007875_020 0.1229067556 - - PREDICTED: pyruvate kinase, cytosolic isozyme-like [Jatropha curcas]
16 Hb_007017_100 0.1256211974 - - PREDICTED: uncharacterized protein LOC105649804 isoform X1 [Jatropha curcas]
17 Hb_000616_010 0.1285394108 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000594_160 0.1296536651 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 8 [Jatropha curcas]
19 Hb_000714_060 0.1330498166 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 1-like [Populus euphratica]
20 Hb_001040_200 0.1340640259 - - PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Jatropha curcas]

Gene co-expression network

sample Hb_005663_090 Hb_005663_090 Hb_001439_010 Hb_001439_010 Hb_005663_090--Hb_001439_010 Hb_000337_030 Hb_000337_030 Hb_005663_090--Hb_000337_030 Hb_000680_070 Hb_000680_070 Hb_005663_090--Hb_000680_070 Hb_006469_090 Hb_006469_090 Hb_005663_090--Hb_006469_090 Hb_005168_020 Hb_005168_020 Hb_005663_090--Hb_005168_020 Hb_005731_070 Hb_005731_070 Hb_005663_090--Hb_005731_070 Hb_001439_010--Hb_006469_090 Hb_001439_010--Hb_000680_070 Hb_003607_140 Hb_003607_140 Hb_001439_010--Hb_003607_140 Hb_003879_020 Hb_003879_020 Hb_001439_010--Hb_003879_020 Hb_004032_110 Hb_004032_110 Hb_001439_010--Hb_004032_110 Hb_019278_010 Hb_019278_010 Hb_000337_030--Hb_019278_010 Hb_000152_120 Hb_000152_120 Hb_000337_030--Hb_000152_120 Hb_001244_070 Hb_001244_070 Hb_000337_030--Hb_001244_070 Hb_000181_220 Hb_000181_220 Hb_000337_030--Hb_000181_220 Hb_170023_010 Hb_170023_010 Hb_000337_030--Hb_170023_010 Hb_000680_070--Hb_006469_090 Hb_000680_070--Hb_000337_030 Hb_007850_110 Hb_007850_110 Hb_000680_070--Hb_007850_110 Hb_000680_070--Hb_004032_110 Hb_006469_090--Hb_007850_110 Hb_000866_190 Hb_000866_190 Hb_006469_090--Hb_000866_190 Hb_006469_090--Hb_003607_140 Hb_000951_090 Hb_000951_090 Hb_005168_020--Hb_000951_090 Hb_002072_040 Hb_002072_040 Hb_005168_020--Hb_002072_040 Hb_005168_020--Hb_000337_030 Hb_000714_060 Hb_000714_060 Hb_005168_020--Hb_000714_060 Hb_005168_020--Hb_000152_120 Hb_000011_370 Hb_000011_370 Hb_005731_070--Hb_000011_370 Hb_007386_030 Hb_007386_030 Hb_005731_070--Hb_007386_030 Hb_007017_100 Hb_007017_100 Hb_005731_070--Hb_007017_100 Hb_005731_070--Hb_000714_060 Hb_000014_080 Hb_000014_080 Hb_005731_070--Hb_000014_080 Hb_000594_160 Hb_000594_160 Hb_005731_070--Hb_000594_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0845114 5.03707 24.9399 27.5822 0.05968 0.0554968
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.30223 0.302636 0.774763 29.7088 20.8488

CAGE analysis