Hb_005694_180

Information

Type -
Description -
Location Contig5694: 131922-133159
Sequence    

Annotation

kegg
ID rcu:RCOM_0144390
description cytochrome B5 isoform 1, putative (EC:1.7.1.1)
nr
ID XP_012083133.1
description PREDICTED: cytochrome b5 [Jatropha curcas]
swissprot
ID P49098
description Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1
trembl
ID A0A067K9E5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14210 PE=3 SV=1
Gene Ontology
ID GO:0009703
description cytochrome - -e isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49256: 131938-133157 , PASA_asmbl_49257: 131931-133184
cDNA
(Sanger)
(ID:Location)		 022_G11.ab1: 131938-133157

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005694_180 0.0 - - PREDICTED: cytochrome b5 [Jatropha curcas]
2 Hb_003430_080 0.0855462369 - - zinc finger protein, putative [Ricinus communis]
3 Hb_034507_060 0.1055078664 - - PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Citrus sinensis]
4 Hb_023226_030 0.1062143074 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Jatropha curcas]
5 Hb_001195_420 0.1108002945 - - PREDICTED: uncharacterized protein LOC105633774 isoform X4 [Jatropha curcas]
6 Hb_000309_030 0.1175538321 - - PREDICTED: formate dehydrogenase, mitochondrial [Jatropha curcas]
7 Hb_012760_090 0.1200994013 - - Aspartic proteinase-like protein 1 [Morus notabilis]
8 Hb_000803_120 0.1232876669 - - PREDICTED: zinc finger CCCH domain-containing protein 22-like isoform X1 [Jatropha curcas]
9 Hb_011457_130 0.1278552935 - - PREDICTED: serine/threonine-protein kinase Nek2 [Jatropha curcas]
10 Hb_000363_410 0.1354271653 - - hypothetical protein JCGZ_00955 [Jatropha curcas]
11 Hb_000740_090 0.1366505337 - - conserved hypothetical protein [Ricinus communis]
12 Hb_172706_020 0.136984237 - - PREDICTED: protein ABIL2 [Jatropha curcas]
13 Hb_002641_160 0.1375525933 - - conserved hypothetical protein [Ricinus communis]
14 Hb_003227_010 0.1385009105 - - PREDICTED: dynamin-related protein 1E-like [Jatropha curcas]
15 Hb_001545_130 0.1390978749 - - sur2 hydroxylase/desaturase, putative [Ricinus communis]
16 Hb_001009_150 0.1411470735 - - Glyceraldehyde-3-phosphate dehydrogenase [Gossypium arboreum]
17 Hb_003710_020 0.142101781 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X1 [Jatropha curcas]
18 Hb_000003_030 0.1465566486 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_127416_010 0.1483208759 - - LysM domain GPI-anchored protein 2 precursor, putative [Ricinus communis]
20 Hb_004218_130 0.1485821956 - - PREDICTED: uridine 5'-monophosphate synthase [Jatropha curcas]

Gene co-expression network

sample Hb_005694_180 Hb_005694_180 Hb_003430_080 Hb_003430_080 Hb_005694_180--Hb_003430_080 Hb_034507_060 Hb_034507_060 Hb_005694_180--Hb_034507_060 Hb_023226_030 Hb_023226_030 Hb_005694_180--Hb_023226_030 Hb_001195_420 Hb_001195_420 Hb_005694_180--Hb_001195_420 Hb_000309_030 Hb_000309_030 Hb_005694_180--Hb_000309_030 Hb_012760_090 Hb_012760_090 Hb_005694_180--Hb_012760_090 Hb_000003_030 Hb_000003_030 Hb_003430_080--Hb_000003_030 Hb_000740_090 Hb_000740_090 Hb_003430_080--Hb_000740_090 Hb_003430_080--Hb_001195_420 Hb_003430_080--Hb_023226_030 Hb_001009_150 Hb_001009_150 Hb_003430_080--Hb_001009_150 Hb_034507_060--Hb_023226_030 Hb_034507_060--Hb_012760_090 Hb_003710_020 Hb_003710_020 Hb_034507_060--Hb_003710_020 Hb_004218_130 Hb_004218_130 Hb_034507_060--Hb_004218_130 Hb_010050_020 Hb_010050_020 Hb_034507_060--Hb_010050_020 Hb_172706_020 Hb_172706_020 Hb_023226_030--Hb_172706_020 Hb_023226_030--Hb_000309_030 Hb_023226_030--Hb_001195_420 Hb_001195_420--Hb_001009_150 Hb_000363_180 Hb_000363_180 Hb_001195_420--Hb_000363_180 Hb_000012_400 Hb_000012_400 Hb_001195_420--Hb_000012_400 Hb_001221_390 Hb_001221_390 Hb_001195_420--Hb_001221_390 Hb_000116_240 Hb_000116_240 Hb_000309_030--Hb_000116_240 Hb_000261_310 Hb_000261_310 Hb_000309_030--Hb_000261_310 Hb_004883_020 Hb_004883_020 Hb_000309_030--Hb_004883_020 Hb_000318_170 Hb_000318_170 Hb_000309_030--Hb_000318_170 Hb_000309_030--Hb_010050_020 Hb_000590_070 Hb_000590_070 Hb_000309_030--Hb_000590_070 Hb_002641_160 Hb_002641_160 Hb_012760_090--Hb_002641_160 Hb_012760_090--Hb_010050_020 Hb_005333_080 Hb_005333_080 Hb_012760_090--Hb_005333_080 Hb_012760_090--Hb_004218_130 Hb_012760_090--Hb_000318_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
26.719 102.7 162.527 249.163 20.1032 30.4949
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
22.6079 9.82968 17.2731 157.938 47.6536

CAGE analysis