Hb_005699_080

Information

Type -
Description -
Location Contig5699: 75132-81064
Sequence    

Annotation

kegg
ID cic:CICLE_v10017566mg
description hypothetical protein
nr
ID XP_012079545.1
description PREDICTED: ABC transporter G family member 10-like [Jatropha curcas]
swissprot
ID Q9MAH4
description ABC transporter G family member 10 OS=Arabidopsis thaliana GN=ABCG10 PE=3 SV=1
trembl
ID A0A067K9Z4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12249 PE=3 SV=1
Gene Ontology
ID GO:0000166
description abc transporter g family member 10-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005699_080 0.0 - - PREDICTED: ABC transporter G family member 10-like [Jatropha curcas]
2 Hb_012753_080 0.2315599918 - - -
3 Hb_011437_030 0.2756827141 - - PREDICTED: uncharacterized protein LOC105037131, partial [Elaeis guineensis]
4 Hb_000304_060 0.2877090207 transcription factor TF Family: GRAS hypothetical protein POPTR_0010s15360g [Populus trichocarpa]
5 Hb_015970_010 0.2882659067 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
6 Hb_000190_100 0.2952849016 transcription factor TF Family: C2H2 hypothetical protein POPTR_0002s04880g [Populus trichocarpa]
7 Hb_163837_010 0.3142099532 - - PREDICTED: putative F-box protein At1g65770 [Eucalyptus grandis]
8 Hb_012760_020 0.3214066903 - - PREDICTED: uncharacterized protein LOC105647080 [Jatropha curcas]
9 Hb_001976_080 0.3233833768 transcription factor TF Family: AP2 PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 [Jatropha curcas]
10 Hb_138652_010 0.3247827383 - - hypothetical protein JCGZ_13474 [Jatropha curcas]
11 Hb_000152_020 0.3253394569 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH118-like [Jatropha curcas]
12 Hb_000000_100 0.325982279 - - hypothetical protein POPTR_0002s13260g [Populus trichocarpa]
13 Hb_007380_010 0.3293667884 - - hypothetical protein EUGRSUZ_L00213, partial [Eucalyptus grandis]
14 Hb_003055_170 0.3294317054 transcription factor TF Family: NAC PREDICTED: NAC transcription factor 25 isoform X1 [Jatropha curcas]
15 Hb_171537_010 0.3302871174 - - serine/threonine-protein kinase bri1, putative [Ricinus communis]
16 Hb_000210_090 0.3317579014 - - PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Jatropha curcas]
17 Hb_007379_020 0.3347105785 - - hypothetical protein JCGZ_25958 [Jatropha curcas]
18 Hb_002035_070 0.3369194352 - - hypothetical protein CICLE_v10033569mg [Citrus clementina]
19 Hb_017434_060 0.3383272599 - - PREDICTED: 60S ribosomal export protein NMD3 [Jatropha curcas]
20 Hb_004032_420 0.3400322125 - - PREDICTED: AT-hook motif nuclear-localized protein 25-like [Jatropha curcas]

Gene co-expression network

sample Hb_005699_080 Hb_005699_080 Hb_012753_080 Hb_012753_080 Hb_005699_080--Hb_012753_080 Hb_011437_030 Hb_011437_030 Hb_005699_080--Hb_011437_030 Hb_000304_060 Hb_000304_060 Hb_005699_080--Hb_000304_060 Hb_015970_010 Hb_015970_010 Hb_005699_080--Hb_015970_010 Hb_000190_100 Hb_000190_100 Hb_005699_080--Hb_000190_100 Hb_163837_010 Hb_163837_010 Hb_005699_080--Hb_163837_010 Hb_000107_320 Hb_000107_320 Hb_012753_080--Hb_000107_320 Hb_012753_080--Hb_000190_100 Hb_006711_050 Hb_006711_050 Hb_012753_080--Hb_006711_050 Hb_012702_030 Hb_012702_030 Hb_012753_080--Hb_012702_030 Hb_000152_020 Hb_000152_020 Hb_012753_080--Hb_000152_020 Hb_011437_030--Hb_015970_010 Hb_003055_170 Hb_003055_170 Hb_011437_030--Hb_003055_170 Hb_000302_090 Hb_000302_090 Hb_011437_030--Hb_000302_090 Hb_003992_230 Hb_003992_230 Hb_011437_030--Hb_003992_230 Hb_000192_110 Hb_000192_110 Hb_011437_030--Hb_000192_110 Hb_000304_060--Hb_163837_010 Hb_000000_100 Hb_000000_100 Hb_000304_060--Hb_000000_100 Hb_012522_010 Hb_012522_010 Hb_000304_060--Hb_012522_010 Hb_012760_020 Hb_012760_020 Hb_000304_060--Hb_012760_020 Hb_000512_070 Hb_000512_070 Hb_000304_060--Hb_000512_070 Hb_000251_090 Hb_000251_090 Hb_000304_060--Hb_000251_090 Hb_015970_010--Hb_003055_170 Hb_015970_010--Hb_000192_110 Hb_001976_080 Hb_001976_080 Hb_015970_010--Hb_001976_080 Hb_007380_010 Hb_007380_010 Hb_015970_010--Hb_007380_010 Hb_000190_100--Hb_000152_020 Hb_000190_100--Hb_007380_010 Hb_017434_060 Hb_017434_060 Hb_000190_100--Hb_017434_060 Hb_005841_080 Hb_005841_080 Hb_000190_100--Hb_005841_080 Hb_000215_410 Hb_000215_410 Hb_000190_100--Hb_000215_410 Hb_000140_410 Hb_000140_410 Hb_000190_100--Hb_000140_410 Hb_163837_010--Hb_012522_010 Hb_161072_010 Hb_161072_010 Hb_163837_010--Hb_161072_010 Hb_000045_150 Hb_000045_150 Hb_163837_010--Hb_000045_150 Hb_000637_120 Hb_000637_120 Hb_163837_010--Hb_000637_120 Hb_163837_010--Hb_012760_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.15332 0.314648 0.027188 0.0330835 0.0636502 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.220154 0.125037 0

CAGE analysis