Hb_005701_010

Information

Type -
Description -
Location Contig5701: 8321-16197
Sequence    

Annotation

kegg
ID vvi:100254089
description uncharacterized LOC100254089
nr
ID XP_012071966.1
description PREDICTED: uncharacterized protein LOC105633877 isoform X1 [Jatropha curcas]
swissprot
ID Q99L90
description Microspherule protein 1 OS=Mus musculus GN=Mcrs1 PE=1 SV=1
trembl
ID A0A067KUC1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04508 PE=4 SV=1
Gene Ontology
ID GO:0044763
description forkhead-associated domain-containing

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49317: 8546-12542 , PASA_asmbl_49320: 13551-13959
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005701_010 0.0 - - PREDICTED: uncharacterized protein LOC105633877 isoform X1 [Jatropha curcas]
2 Hb_000563_550 0.0869423717 - - PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Jatropha curcas]
3 Hb_002603_160 0.1036020242 - - Arginyl-tRNA--protein transferase, putative [Ricinus communis]
4 Hb_002551_020 0.1198142468 - - PREDICTED: phospholipase SGR2 isoform X1 [Jatropha curcas]
5 Hb_005188_090 0.1209394464 - - PREDICTED: phosphatidylinositol 4-kinase gamma 7-like [Jatropha curcas]
6 Hb_000069_460 0.1216114382 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Jatropha curcas]
7 Hb_003147_050 0.1253957781 - - nucleic acid binding protein, putative [Ricinus communis]
8 Hb_005043_010 0.1263996498 - - calcium ion binding protein, putative [Ricinus communis]
9 Hb_001329_300 0.1276322966 - - PREDICTED: L-cysteine desulfhydrase [Jatropha curcas]
10 Hb_023292_010 0.1288793311 - - Cucumisin precursor, putative [Ricinus communis]
11 Hb_168773_010 0.1320084066 - - ABC transporter family protein [Hevea brasiliensis]
12 Hb_000115_060 0.1327306788 - - PREDICTED: uncharacterized protein LOC103341483 [Prunus mume]
13 Hb_002290_040 0.1337936255 - - conserved hypothetical protein [Ricinus communis]
14 Hb_007416_270 0.1339869017 - - PREDICTED: uncharacterized protein LOC105637478 [Jatropha curcas]
15 Hb_131864_040 0.1350088369 - - PREDICTED: uncharacterized protein LOC105649406 isoform X1 [Jatropha curcas]
16 Hb_000221_270 0.1360479801 - - hypothetical protein JCGZ_15813 [Jatropha curcas]
17 Hb_001959_160 0.1363150514 - - PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Jatropha curcas]
18 Hb_008066_010 0.1382954633 - - PREDICTED: translation initiation factor eIF-2B subunit alpha-like [Jatropha curcas]
19 Hb_001616_120 0.1384524231 - - -
20 Hb_001002_030 0.1389427507 - - PREDICTED: uncharacterized protein LOC105643537 [Jatropha curcas]

Gene co-expression network

sample Hb_005701_010 Hb_005701_010 Hb_000563_550 Hb_000563_550 Hb_005701_010--Hb_000563_550 Hb_002603_160 Hb_002603_160 Hb_005701_010--Hb_002603_160 Hb_002551_020 Hb_002551_020 Hb_005701_010--Hb_002551_020 Hb_005188_090 Hb_005188_090 Hb_005701_010--Hb_005188_090 Hb_000069_460 Hb_000069_460 Hb_005701_010--Hb_000069_460 Hb_003147_050 Hb_003147_050 Hb_005701_010--Hb_003147_050 Hb_005043_010 Hb_005043_010 Hb_000563_550--Hb_005043_010 Hb_148209_110 Hb_148209_110 Hb_000563_550--Hb_148209_110 Hb_000563_550--Hb_002603_160 Hb_000563_550--Hb_002551_020 Hb_002897_060 Hb_002897_060 Hb_000563_550--Hb_002897_060 Hb_131864_040 Hb_131864_040 Hb_002603_160--Hb_131864_040 Hb_003018_190 Hb_003018_190 Hb_002603_160--Hb_003018_190 Hb_006846_110 Hb_006846_110 Hb_002603_160--Hb_006846_110 Hb_002603_160--Hb_005188_090 Hb_000223_150 Hb_000223_150 Hb_002603_160--Hb_000223_150 Hb_001141_280 Hb_001141_280 Hb_002603_160--Hb_001141_280 Hb_011671_220 Hb_011671_220 Hb_002551_020--Hb_011671_220 Hb_168773_010 Hb_168773_010 Hb_002551_020--Hb_168773_010 Hb_004109_190 Hb_004109_190 Hb_002551_020--Hb_004109_190 Hb_000029_020 Hb_000029_020 Hb_002551_020--Hb_000029_020 Hb_002496_050 Hb_002496_050 Hb_002551_020--Hb_002496_050 Hb_000061_320 Hb_000061_320 Hb_002551_020--Hb_000061_320 Hb_000172_560 Hb_000172_560 Hb_005188_090--Hb_000172_560 Hb_000236_140 Hb_000236_140 Hb_005188_090--Hb_000236_140 Hb_005188_090--Hb_005043_010 Hb_007416_270 Hb_007416_270 Hb_005188_090--Hb_007416_270 Hb_003687_100 Hb_003687_100 Hb_005188_090--Hb_003687_100 Hb_008066_010 Hb_008066_010 Hb_000069_460--Hb_008066_010 Hb_000221_270 Hb_000221_270 Hb_000069_460--Hb_000221_270 Hb_000110_160 Hb_000110_160 Hb_000069_460--Hb_000110_160 Hb_001329_300 Hb_001329_300 Hb_000069_460--Hb_001329_300 Hb_000051_110 Hb_000051_110 Hb_000069_460--Hb_000051_110 Hb_000446_090 Hb_000446_090 Hb_000069_460--Hb_000446_090 Hb_001538_140 Hb_001538_140 Hb_003147_050--Hb_001538_140 Hb_002078_460 Hb_002078_460 Hb_003147_050--Hb_002078_460 Hb_002290_040 Hb_002290_040 Hb_003147_050--Hb_002290_040 Hb_000162_140 Hb_000162_140 Hb_003147_050--Hb_000162_140 Hb_005839_110 Hb_005839_110 Hb_003147_050--Hb_005839_110 Hb_003929_120 Hb_003929_120 Hb_003147_050--Hb_003929_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.77954 3.33195 1.77666 2.47972 9.87196 20.2814
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
23.1718 12.4488 35.9198 10.4992 5.75654

CAGE analysis